Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2204 ATGGATAATCAGCAGCACTACCAAATAGGTGAAGCTGCTACGACCAAAATCGAAAGAAAGGTGTTAGAGAAAAACAGGAGAAACCTTATGAAGGACCTCTGTTTGAAGCTCAACTCTCTTCTCCCTAACTTCAACCCCAGAGAACCATTACGGCGTGGTGAACAAATCGATGAAGCGGTGAAGTACATTGAAAGGCTAGAGACGAGGGTGAAGATGGGAAAGGAGAAGAAAGAGAGGCTATTGCTGTTAATTGGAAGGAACAATAATAATAATAATAAGAGATGCCGCGGCACAGAAGAAGAAAGCCTCAAAATGGCGACGAGGATGAAAGCGCCAATAAGGATGGAGGTTCATGAAATGGGTTCGTCGTTACAAGTGGTTCTCACCTGCGGCTTCGAGAGCCACTTCATTTTCACAGAAATCATTCGCATTCTGCATGAACACAACTTTGATGTTGTTGCCGCTAATTCTTCACTCAACGCAGATTCAACGCTTCATGTTCTGCACGCCCACCAGATTCGACAATTCAATCAATCAGGAGCAACCAAAGTAAGCGAGAAATTGAAAAGGTTCGTGAACGGACATCGGCAAGACTTCCAAGGAACATAA 609 0.4401 MDNQQHYQIGEAATTKIERKVLEKNRRNLMKDLCLKLNSLLPNFNPREPLRRGEQIDEAVKYIERLETRVKMGKEKKERLLLLIGRNNNNNNKRCRGTEEESLKMATRMKAPIRMEVHEMGSSLQVVLTCGFESHFIFTEIIRILHEHNFDVVAANSSLNADSTLHVLHAHQIRQFNQSGATKVSEKLKRFVNGHRQDFQGT* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2204 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 81 IPR036638 GO:0046983
Aev10g2204 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 66 IPR011598 GO:0046983
Aev10g2204 202 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 14 197 IPR015660 GO:0003700|GO:0006357
Aev10g2204 202 Pfam Helix-loop-helix DNA-binding domain 18 67 IPR011598 GO:0046983
Aev10g2204 202 Gene3D - 7 108 IPR036638 GO:0046983
Aev10g2204 202 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 14 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2204 Aev-Chr10 22384305 22386599 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2204 17 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.168 2.19e-22 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g2204 HLH 1.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2204 - - gmx:100805461 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2204 10 22384305 22386599 Aev10g2204 10 22384305 22386599 ECH