Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2203 ATGGATCAGCGGCGTCGTCGGGGACGTCAACCTGGTGGTGCGGCCAAAATGGAAAGAAAGATCATAGAGAGAAACAGGAGAAACCACATGAAGGATCTTCATTCCAAACTCAACTCTCTTCTCCCTATCAACTATAACAATCCCACGCCCAGGGAAGTGGTATCTTTGCCTGATCAAATAGAGGAAGCTATAAAGTACATAAAGAGGCTGGAGACAAATGTGAAGATGGCCAATGAGAAGAAACAATCATCAATACTATTAAGGAATCATAATAATAAGAAGAAGAAGAAGAAGAGATGTGGTTGCACTAGTACTAGTACTGAAATCCAGATTCATGAAGTTGGGTCGTCGCTTGAAGTGGTTCTGAGTTGCGGATTGGATGAGCACTTCATTTTCAGGGAAATCATTCGCATTCTGCATGAACACAGTGTAGATGTTGTTAGAGTCAACTCTTCCATGGCCCCACATCATCATCATCATTCACTAATGCTTCATGTTCTCCATGCACAGATTCCCCCATCACTCTTGGGAACCACCAAACTCATAAGCGAGAAATTGAAAAGTTTTGTCAACGATCATCATGTGGAAACAACTCACCCACATGAACACGACTTGTTCTTCTCCTCGGCTTATGAAGTCACCAATGACGACCTCATGTGGGATCTTCTTCCAAATCTTTAA 681 0.4258 MDQRRRRGRQPGGAAKMERKIIERNRRNHMKDLHSKLNSLLPINYNNPTPREVVSLPDQIEEAIKYIKRLETNVKMANEKKQSSILLRNHNNKKKKKKRCGCTSTSTEIQIHEVGSSLEVVLSCGLDEHFIFREIIRILHEHSVDVVRVNSSMAPHHHHHSLMLHVLHAQIPPSLLGTTKLISEKLKSFVNDHHVETTHPHEHDLFFSSAYEVTNDDLMWDLLPNL* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2203 226 SMART finulus 20 76 IPR011598 GO:0046983
Aev10g2203 226 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 197 IPR015660 GO:0003700|GO:0006357
Aev10g2203 226 Coils Coil 60 80 - -
Aev10g2203 226 Pfam Helix-loop-helix DNA-binding domain 16 71 IPR011598 GO:0046983
Aev10g2203 226 PANTHER HELIX LOOP HELIX DNA-BINDING DOMAIN PROTEIN 15 197 - -
Aev10g2203 226 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 14 70 IPR011598 GO:0046983
Aev10g2203 226 Gene3D - 16 75 IPR036638 GO:0046983
Aev10g2203 226 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 16 72 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2203 Aev-Chr10 22377064 22378419 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2203 12 194 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 30.890 3.73e-19 80.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev10g2203 HLH 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2203 - - gmx:100817883 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2203 10 22377064 22378419 Aev04g2613 04 25827123 25830740 PCT