Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2198 ATGGGGTTGAGATTTGGCATGGTTGCCACTGAACGATTGGAGCTTTTGTTAAGAATTGCATTTGGGTGGTTGGTTGTTCTACTGGTTCTTCGTCCTGTGGCTGCTCTCAGACCCTTAAGGGATAGTACTCGGTCTTGGGGTGATGAGTGGCTATTTACAAGAAAAGACGAGGGTGACATTGGTCCATTTTCACAATGGAACATAACAGGAACTTACAGAGGGAATTGGAAGTTTTTAGATACTGCAAATGGCTCTTCCAGATTTCCAGACATCAGAAAAACAAATGGTAATTCTGTACTTGAATTAGTTAGTACACCCACGAAGATAACTGGAGTACATTATGTCCAGGGGGTAGTTATATTCCATGATGTTTTTGACAATGAATATGATGTTGGTGGTGCTCAAATCAAAGTAGAAGGTGTATATATATGGCCTTTTCGACAGCTTCGAATGGTAGCCAATAGTGGAAAAGATGGGGAGTCGAATCAAGATGAAGATTATATTTTATCTAATCCATATCATCTGCTTGGAGTCTTTTCATCTCAGGTTCTGCAAGATTCTTCGCGAGATAAGATGTGGAGAAGAAAACATTCTCCGATGCATGACATGGAGAAACATTGTAATATTGAAATTGCCGCACAGGTTTCACACTTGCCGTCATCAAAAAATGAAGGAGAGCGTGATCTTTTTCACCTTGAAGGGTTAATGGAGAGTCCCTCTGTGGATGATGATGGGGATTGCTTCTCACCTTTAATGTTAAATGCCACTTCTGTTAATATTGAGGTCTACTATAACAAAGCAGTGAACTATACCTTGATGGTTACTTTTATCTCTTTCTTGCAAGTTCTTCTATTGATTCGGCAAATGGAGCATAGCAGCACTCAATCTGGGGCTGCTAAGGTGTCAATATTAATGATTGGCCAGCAAGCGATAATGGATGCTTATCTTTGCCTTTTGCATCTGACTGCAGGAATACTAGTTGAATCCTTGTTTAACGCATTTGCAACTGCTGCTTTCTTCAAGTTTGTTGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATCTGGAAAGCTAGTAGGCCTTTGAGTAATGGGGAAGGTTGGGAGACAATGAGGCGTGAACTTTCACTGTTATACAGTCGTTTCTATGGAATCCTGTTGGGAGGCATTCTACTCATGTATGAGTTCCATCATTATTTAAGACCTATTCTTCTTCTTATGTACTCCTTTTGGATACCTCAGATAATTACCAATGTGATTCGAGATTCACGCAAACCATTGCATCCTCATTATATCTTAGGGATAACTGTCACTCGGTTAGCAATCCCATTATATATTTTCGGTTGCCCTAACAACTTCATGCGCATAGAACCAGACAAGAGCTGGTGTGTTTGGCTTACTGTATTTATTGGGCTTCAAGCCACTGTTCTTCTACTTCAGCATTATCTCGGGTCGCGCTGGTTCATTCCACGCCAAATATTGCCTGAGAAATACAGCTATTACAGGAGGTTTGATCAGGATACGAGACATCCAACAGATTGTGTCATTTGTATGGCAGGAATTGATCTTAACATGCGGTCTAATGATTGCATGGTGACACCTTGTGATCATTTCTTCCACTCCGGTTGTTTGCAAAGATGGATGGATATCAAGATGGAGTGCCCGACTTGCCGGCGACCTCTACCACCTGCATAA 1698 0.4117 MGLRFGMVATERLELLLRIAFGWLVVLLVLRPVAALRPLRDSTRSWGDEWLFTRKDEGDIGPFSQWNITGTYRGNWKFLDTANGSSRFPDIRKTNGNSVLELVSTPTKITGVHYVQGVVIFHDVFDNEYDVGGAQIKVEGVYIWPFRQLRMVANSGKDGESNQDEDYILSNPYHLLGVFSSQVLQDSSRDKMWRRKHSPMHDMEKHCNIEIAAQVSHLPSSKNEGERDLFHLEGLMESPSVDDDGDCFSPLMLNATSVNIEVYYNKAVNYTLMVTFISFLQVLLLIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKASRPLSNGEGWETMRRELSLLYSRFYGILLGGILLMYEFHHYLRPILLLMYSFWIPQIITNVIRDSRKPLHPHYILGITVTRLAIPLYIFGCPNNFMRIEPDKSWCVWLTVFIGLQATVLLLQHYLGSRWFIPRQILPEKYSYYRRFDQDTRHPTDCVICMAGIDLNMRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRPLPPA* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2198 565 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 10 565 - -
Aev10g2198 565 SUPERFAMILY RING/U-box 496 564 - -
Aev10g2198 565 SMART ring_2 515 558 IPR001841 -
Aev10g2198 565 PANTHER RING ZINC FINGER PROTEIN 10 565 - -
Aev10g2198 565 SMART ringv_2 514 559 IPR011016 GO:0008270
Aev10g2198 565 Pfam Ring finger domain 514 559 IPR001841 -
Aev10g2198 565 ProSiteProfiles Zinc finger RING-type profile. 515 559 IPR001841 -
Aev10g2198 565 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 501 565 IPR013083 -
Aev10g2198 565 CDD RING-H2 515 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2198 Aev-Chr10 22354386 22359255 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2198 514 563 C3H Transcription Factor Family AT1G53010 39.216 2.90e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2198 K23788 - gmx:100785460 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2198 10 22354386 22359255 Aev10g2198 10 22354386 22359255 ECH