Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2196 ATGATGGGGTTGAGATTTGACATGGTCGCCACTGAAAGGTTGGAGCTTTTGTTAAGAATTGCATTTGGGTGGTGGGTTGTTCTACTGTTTCTTCGCCCCGTGGCCGCTCTCAGACCCTTAAGGGACAGAACTCGGTCTTGGGGTGATGAGTGGCTAGTTGCAAGAAAAGATGAGAGTGACATTGGTCCATTTTCACAATGGAACATATCAGGAACTTACAGAGGGACTTGGAAGTTTTCAAATACCTCAAATAGCCCTTCCAGATTTCCAGACCTCAGAAAAACAAATGGTGATTCTGTAATTGAGTTGATTACTACACCCACAAAGATAACTGGAGTACATTATGTTCAGGGGATAGTTATATTCCATGATGTTTTTGACAATGAATATAATGTTGGTGGTGCCCAAATCAGACTAGAAGGTGTATATATATGGCCTTTTAGACAGCTTCGAATGGTAGCCAACAGTGGAAAAGAGGGACATTTGATTCAGGATGAGGATTATATTTTATCTAATCCATATCATCTGCTTGGAGCTTTTTCCTCTCAGGTACTGCAAGATTCTTCACGAGATAAGATGTGGAAAAGAAAACATTCTTCGATGCATGGCATAGAGAAACATTGCAATATTGAAATTGCTGCACAGATTTCACGCTTGTCATCAACAAAAAATGAAGGAGAACATGATCGTTTTCGCCTAGAAGGGTTAATGGAGAGTCCATCTGTGGTGGATGATGAGGACTGCTTCTCATCTTTATTTTTAAATACTACTTCTGTCAACATCGAGGTCTACTATAACAAAGCAGTGAACTTTACCTTGATGGTTACTTTTGTCTCTTTCTTACAAGTTCTCATATTGATTCGCCAAATGGAGCATAGCAGCACTCAATCTGGGGCTGCTAAAGTTTCAATTTTAATGATTGGCCAGCAAGCAATAATGGATGCTTACCTTTGCCTTTTACATCTGACTGCAGGAATATTAGTTGAATCCTTGTTTAATGCTTTTGCAACTGCTGCATTTTTCAAGTTTGTTGTCTTCTCAATATTTGAGATGAGATATCTCCTTGCCATCTGGAAGGCAAATAGGCCTTTGAGTAACACGGATGGTTGGGAGACAATGAGGCGTGAACTCTCCGTTTTATACAGCCGTTTCTATGGAATTCTGTTGGGAGGCATTCTACTCATGTACGAGTTCCATCAGTATTTGAGGCCAATTCTTCTTCTTATGTACTCCTTTTGGATACCTCAGATTATCTCCAATGTTATCCGTGATTCACGCAAACCATTGCATCCTCATTATATCATAGGGATAACTGTTACTCGGCTAGCAATCCCATTCTATATTTTCGGTTGCCCTAATAACTTCATGCGCATAGAACCAGACAGGAGCTGGTGTGTGTGGCTGACAGTATTCATCGGGGTTCAAGCTTCAATTCTTCTACTTCAGCATTATCTTGGGTCGCGTTGGTTCATTCCTCGCCAGATATTACCTGAGAAATACAGCTATTACAGGAGGTTTGATCAAGATACGAGACATTCAACAGACTGTGTCATTTGCATGACAGGAATTGATCTTAACCTCCGGTCTAATGACTGCATGGTGACACCTTGTGATCATTTCTTCCACTCCGGTTGTTTGCAAAGATGGATGGATATCAAGATGGAGTGCCCAACATGCCGGCGCCTTCTTCCGTCTGCGTAG 1701 0.4133 MMGLRFDMVATERLELLLRIAFGWWVVLLFLRPVAALRPLRDRTRSWGDEWLVARKDESDIGPFSQWNISGTYRGTWKFSNTSNSPSRFPDLRKTNGDSVIELITTPTKITGVHYVQGIVIFHDVFDNEYNVGGAQIRLEGVYIWPFRQLRMVANSGKEGHLIQDEDYILSNPYHLLGAFSSQVLQDSSRDKMWKRKHSSMHGIEKHCNIEIAAQISRLSSTKNEGEHDRFRLEGLMESPSVVDDEDCFSSLFLNTTSVNIEVYYNKAVNFTLMVTFVSFLQVLILIRQMEHSSTQSGAAKVSILMIGQQAIMDAYLCLLHLTAGILVESLFNAFATAAFFKFVVFSIFEMRYLLAIWKANRPLSNTDGWETMRRELSVLYSRFYGILLGGILLMYEFHQYLRPILLLMYSFWIPQIISNVIRDSRKPLHPHYIIGITVTRLAIPFYIFGCPNNFMRIEPDRSWCVWLTVFIGVQASILLLQHYLGSRWFIPRQILPEKYSYYRRFDQDTRHSTDCVICMTGIDLNLRSNDCMVTPCDHFFHSGCLQRWMDIKMECPTCRRLLPSA* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2196 566 SMART ring_2 516 559 IPR001841 -
Aev10g2196 566 Pfam Ring finger domain 515 560 IPR001841 -
Aev10g2196 566 PANTHER TRANSMEMBRANE E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE 8 565 - -
Aev10g2196 566 SUPERFAMILY RING/U-box 496 564 - -
Aev10g2196 566 CDD RING-H2 516 560 - -
Aev10g2196 566 PANTHER RING ZINC FINGER PROTEIN 8 565 - -
Aev10g2196 566 ProSiteProfiles Zinc finger RING-type profile. 516 560 IPR001841 -
Aev10g2196 566 SMART ringv_2 515 560 IPR011016 GO:0008270
Aev10g2196 566 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 502 566 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2196 Aev-Chr10 22345700 22350426 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2196 507 566 C3H Transcription Factor Family AT1G53010 34.426 8.63e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2196 K23788 - gmx:100785460 971.459