Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2188 ATGTCTCTCCCTGCACAGAGAAACTGTCTTCGCACCTTCATCCAAACCATGCACGACGAGGGAATTGTGAATGGCCAATTCTGTGAGCTACAATTCATGAAGGAGATTATTGGTCGGGATTATGCTGTGAGAGTTATAACTAGGTTCTGTATGGCTAGCATTGATTTGTTCTCGTCCTTGACGGATCAAATCTACCAGCAACAGGTTGATTTTCAGAAGGTGCATGTTCTCACTCGTGAACTATATGCAAGAACCACCTGGGTTGGTGCAGAGGGTGTCAGGCATGCATCTACTGAGCTCCTTTATGCTTGTGACATAAAAGATAAGAATCATTGCTTCTGGGCTCTATATTGGACCAAGCATGAATTTTCTTATTTGAGGAGAAATCTTGAAATCCTTGTGCAGCGCTTCATGCATGATACTTTCTTCCAACTGAAGCCTCAGTCTTCCTCTGGGTTCTGCTTCTCTATGGGCGCTGCCCTTCTGCTTTTAATAAAAATGGCTATGGAAATTCTCAAGGAACTCTTGCAAGGATACTTGAACTCACTGTGTGATGAGGGGCTAATGAATGAACACTTTCTGTCTCTGGAAGACACAAGGGAACCACAATATGTTGTCCAGATGATTGAAAACTACACTGCTGATGTTGACATGATCCTTTCAGAGCTTTCTCGTCATGTTGAGAACTCAAAAGTTGACTTCTGTAGGTTGGCTTCTCTAGTTCGTGAAATTGAGGATAAGAGCGCAAGCATTGGTGCCGAGCATATGAAGCTTGCGTGTTCAGATCTCATTAAAGCTTGTGATGAGAAGAACAAAAGAAGTTTCTCTCGAAGTGTGTTCTGGCTTGAACGTGAGTTTAGTACAACCAAGAACAAGTTGGCGGCCGTTGTTCAGTGTGCTAAAAATGGCCGCAGTAGTGAGCCACCACCACGTATTCTCCGCCGTCACGCGCTTCAGCTCCTCCTCCACCACCATAATCACCGCGAGGAGAGAGTCCTCAACGGCATGTGGCAGACGAGTGGAGGCTGGGGCCGAATCGACCGAGACGACGCCGTCGAGGCCATGCTTCGCTACGCCGACGCCGGCCTCTCCACCTTCGACATGGCCGATCACTATGGGCCTGCTGAAGATCTGTATGGGATTTTCATTAATCGAGTTCGCCGTGAGCGTCCACCGGAATTCTTGGAAAAGGTCAGAGGTCTCACTAAATGGGTGCCGCCACCAGTTAAGATGACAAGAAGCTTTGTAAGCGACAGCATTAATGTTTCAAGGAAGAGAATGGATGTGGATTCCTTAGACATGCTTCAGTTTCATTGGTGGGATTATTCAAATCCCGGCTACCTTGATGCACTAAAACATCTTACAGATCTGAAAGATGAAGGTAAAATCAAGACTGTGGCCTTGACAAATTTTGATACAGAGAGGTTACAAATTATTCTTGAAAATGAGATTCCTGTTGTAAGCAATCAGGTGCAACATTCACTTGTTGACATGCGTCCACAACAGAGAATGGTGGAGCTTTGTCAGCTTTCAGGAGTCAAACTTATAACGTATGGAACCGTAATGGGCGGTTTACTATCAGAGAAGTTCCTTGACACCAACATATCTATTCCCTTTGCTGGTCCTGCATTAAACACTCCCTCCCTCCAAAAGTACAAAAGGATGATAGATGCTTGGGGAGGATGGAATTTGTTCCAGGGACTGCTTCGGACTCTTAAACAAGTAGCTACTAAACATGGAGTTTCAATCCCAACTGTTGCTGTAAAATACATCCTAGATCAGCCTGCAGTAGCAGGATCGATGGTTGGTGTTAGGCTTGGCTTGGCAGAACACATCCAAGACTGCAATGCAATCTTTTCACTTGTTCTTGATGAGGATGATGTAAACAGCATAAGAGAAGCCTCAGTGAAAGGAAAGGATCTGCTTAAAGTCATTGGTGATTGTGGAGATGAAGTTTCACTCCAAACAATTCGCAATTTCCAAACGCACAAGAAGCACTCTGAGCCTTGGAAGAACGATTACCACAAAGCAGCCATGGACGTCGATTCACAGCCAACTATGGAAGAAACGATTTTGGTGGGTGATGACCTGATGATGGGTCCACCATCACCTGTAGTGCCACCGGAAATTGCATCCCATGTGCTCCAAGGTGTTGATTTGTGTGATGGAATCCTCAAGAATATGTTTTTGTGCTTGCAAATCAATGACATTGAACCATTCTGTCAGGATGAGCTTGCTGTGTATAAACAATGTTCTGAAAGAAGGGATAAAGAGATAAGGAAGCGTCTTCAAGACAGTGAATGGAAGTTGGGTTCATCAATGCCTTTAGATGAAGCCAAGGAGAGGGCTTCTCAGCTTGAGGCAGAAGTTACGTCATTGGACAGGCGCCTGATTCTTGCTAGTGGAGTTGAAGGCATGGAAGGTTTCCGCCAAAGATGGAGCTTACATGGCCGCCTCACTGATTCCAAAAGAAACCCTATCTCGCTATCTCGCTCGCTCCGCAATCGCAGTCCCAATCGTAACCCTTCTCACTTCCCTGCAAGAATGAAGGTCATTGCTGCATATTTGCTCGCTGTTTTGGGTGGAAACACCGCCCCTTCTGCTGCTGATCTCAAGAAAATTCTTTCTTCAGTTGGAGCTGAGGCTGAGGATGACATGATTGAGTTGCTCTTGACTGAAGTTAAGGGCAAGGATATCACCGAGCTAATTGCTAGTGGAAGAGAGAAGTTGGCTTCAGTGCCTAGTGGCGGTGGCGCTGCTGCTGTTGCTGCCGCACCTGCAGGAGGTGCTCCAGCTGGTGGTGCTGCACCAGCTGCAGAAGCCAAGGAAGAAAAGAAGGTGGAAGAGAAGGAGGAATCGGATGATGATATGGGTTTCGGCTTGTTCGATTAA 2892 0.4609 MSLPAQRNCLRTFIQTMHDEGIVNGQFCELQFMKEIIGRDYAVRVITRFCMASIDLFSSLTDQIYQQQVDFQKVHVLTRELYARTTWVGAEGVRHASTELLYACDIKDKNHCFWALYWTKHEFSYLRRNLEILVQRFMHDTFFQLKPQSSSGFCFSMGAALLLLIKMAMEILKELLQGYLNSLCDEGLMNEHFLSLEDTREPQYVVQMIENYTADVDMILSELSRHVENSKVDFCRLASLVREIEDKSASIGAEHMKLACSDLIKACDEKNKRSFSRSVFWLEREFSTTKNKLAAVVQCAKNGRSSEPPPRILRRHALQLLLHHHNHREERVLNGMWQTSGGWGRIDRDDAVEAMLRYADAGLSTFDMADHYGPAEDLYGIFINRVRRERPPEFLEKVRGLTKWVPPPVKMTRSFVSDSINVSRKRMDVDSLDMLQFHWWDYSNPGYLDALKHLTDLKDEGKIKTVALTNFDTERLQIILENEIPVVSNQVQHSLVDMRPQQRMVELCQLSGVKLITYGTVMGGLLSEKFLDTNISIPFAGPALNTPSLQKYKRMIDAWGGWNLFQGLLRTLKQVATKHGVSIPTVAVKYILDQPAVAGSMVGVRLGLAEHIQDCNAIFSLVLDEDDVNSIREASVKGKDLLKVIGDCGDEVSLQTIRNFQTHKKHSEPWKNDYHKAAMDVDSQPTMEETILVGDDLMMGPPSPVVPPEIASHVLQGVDLCDGILKNMFLCLQINDIEPFCQDELAVYKQCSERRDKEIRKRLQDSEWKLGSSMPLDEAKERASQLEAEVTSLDRRLILASGVEGMEGFRQRWSLHGRLTDSKRNPISLSRSLRNRSPNRNPSHFPARMKVIAAYLLAVLGGNTAPSAADLKKILSSVGAEAEDDMIELLLTEVKGKDITELIASGREKLASVPSGGGAAAVAAAPAGGAPAGGAAPAAEAKEEKKVEEKEESDDDMGFGLFD* 964
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2188 963 Gene3D HPT domain 5 141 IPR036641 GO:0000160
Aev10g2188 963 PANTHER OS09G0567350 PROTEIN 292 652 - -
Aev10g2188 963 CDD Ribosomal_P2 849 963 IPR044076 GO:0002182|GO:0003735|GO:0022625
Aev10g2188 963 Gene3D - 322 646 IPR036812 -
Aev10g2188 963 SUPERFAMILY NAD(P)-linked oxidoreductase 325 634 IPR036812 -
Aev10g2188 963 Coils Coil 776 796 - -
Aev10g2188 963 Gene3D - 848 906 IPR038716 -
Aev10g2188 963 MobiDBLite consensus disorder prediction 939 953 - -
Aev10g2188 963 Pfam Aldo/keto reductase family 333 634 IPR023210 -
Aev10g2188 963 Gene3D HPT domain 167 303 IPR036641 GO:0000160
Aev10g2188 963 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 184 298 IPR036641 GO:0000160
Aev10g2188 963 Pfam 60s Acidic ribosomal protein 866 962 - -
Aev10g2188 963 PANTHER PROTEIN TAS 292 652 - -
Aev10g2188 963 CDD AKR_unchar 331 634 - -
Aev10g2188 963 Hamap 50S ribosomal protein L12 [rpl12]. 850 963 IPR027534 GO:0003735|GO:0005840|GO:0006414
Aev10g2188 963 MobiDBLite consensus disorder prediction 917 963 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2188 Aev-Chr10 22281098 22301367 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2188 849 963 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 64.348 9.82e-29 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2188 - - ahf:112750441 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2188 10 22281098 22301367 Aev10g2188 10 22281098 22301367 ECH