Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2180 ATGGCGGAAGAACACAGATGTCAAGCTCCGCGTCTCTGCGCCAACAATTGCGGGTTCTTCGGCAGTGCCGCCACACAAAACCTATGCTCCAAGTGCTACCGCGATTTGCAGCTCAAAGAACAACAATCATCCTCCGCAAAGCTCGTCCTCAACCAATCGCTAGTTCCTCCTTCGCCGTCTCCGGCTGCGATCGCTCAGCCGTCTTCTTCCTCCTCGCCACTGGCGGCATCGGTCGACTCCTCTTCTCCTGCGGCACCAGATGTGGTCGATCCGCCGCCTGTCTCCGAGGAGGCGAAACCGGCGGCGCAACCTAACCGGTGCGGGACGTGCAGGAGGCGCGTGGGACTCACGGGGTTCAAGTGCAGGTGCGGGTTGACGCTGTGCGGCACGCACCGTTACCCGGAACAACACGGCTGTGAGTTCGACTTCAAGGGAATGGGAAGGGAACAGATCGCGAAGGCGAATCCCGTTGTGAAGGCTGAGAAGCTCGACAAGATCTGA 501 0.5988 MAEEHRCQAPRLCANNCGFFGSAATQNLCSKCYRDLQLKEQQSSSAKLVLNQSLVPPSPSPAAIAQPSSSSSPLAASVDSSSPAAPDVVDPPPVSEEAKPAAQPNRCGTCRRRVGLTGFKCRCGLTLCGTHRYPEQHGCEFDFKGMGREQIAKANPVVKAEKLDKI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2180 166 ProSiteProfiles Zinc finger AN1-type profile. 101 147 IPR000058 GO:0008270
Aev10g2180 166 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Aev10g2180 166 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Aev10g2180 166 Gene3D - 1 81 - -
Aev10g2180 166 Gene3D - 82 162 IPR035896 -
Aev10g2180 166 Pfam AN1-like Zinc finger 107 143 IPR000058 GO:0008270
Aev10g2180 166 MobiDBLite consensus disorder prediction 49 106 - -
Aev10g2180 166 MobiDBLite consensus disorder prediction 49 79 - -
Aev10g2180 166 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Aev10g2180 166 SUPERFAMILY AN1-like Zinc finger 96 161 IPR035896 -
Aev10g2180 166 SMART AN1_Zf_4 107 144 IPR000058 GO:0008270
Aev10g2180 166 Pfam A20-like zinc finger 11 34 IPR002653 GO:0003677|GO:0008270
Aev10g2180 166 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 3 1 166 - -
Aev10g2180 166 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2180 Aev-Chr10 22228891 22229391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2180 1 166 C2H2 Transcription Factor Family AT3G52800 55.233 4.69e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2180 - - gmx:100807363 220.32