Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2170 ATGTACCATCATCATCAAGGAAAGAGCATGCACTCTTCATCATCAAGAATGGCAATCCCTTCTGAGAGGCACATGTTCCTTCAAGCAGGGAATGGTTCTGGTGATTCTGGACTTGTCCTGTCAACTGATGCTAAGCCTAGATTGAAATGGACCCCGGATCTTCATGCCAGGTTCATAGAAGCAGTGAATCAACTAGGTGGAGCTGACAAGGCGACTCCAAAAACTGTAATGAAACTCATGGGGATTCCAGGACTTACCTTGTATCATCTTAAAAGCCATCTACAGAAATACAGATTGAGCAAGAACTTACATGGACAAAGCAACAATATGACACACAAAATAACAACAAATGTTGGTGCAACAACAACTGAAAGACTTCCTGAACCCAATGGAACTCAAATGAACAAATTAAGCCTTGTGCCGCAGCCAAACAAAGATATACACATAAGTGAGGCACTGCAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTGCAGGTCCGGATAGAGGCGCAAGGAAAATACCTGCAATCTGTGCTAGAGAAAGCTCAGGAAACACTTGGCAGACAAAATTTGGGAGTAGTAGGACTTGAAGCTGCTAAAGTTCAACTTTCAGAGCTAGTGTCAAAGGTATCATCTCAGTGCCTGAACTCAGCATTTTCTGAGATGAAGGAACTACAAGGATTCTGCCCTCAGCAAGCACAACAAACCAGCCTCCCAAATGACTGCTCAATGGACAGTTGCCTCACATCGTGCGAGGGATCGCAGAAGGAGCAAGAGATACAGAATGGTGGGGTTGGATTAAGGCACTTAAATGGCCATTCATTCATGGAAAGGAAAGAAGCAGCAATAGAAGCTCACAACAATCTGAGGAACAACAAGAGTGAGATCAGGTGGTGTGATGAGGTGAAAAAGAACAGTTTTCTGACCCCTTTGGGAAGGAATGCAGAGAGAGGCAGTTATGTTGCAGAAAGAAGCACTAGCAACTTGTCTATGACCATTGGACTTGACAGAGAAACTGAGAATCACTCAGATGGAGGTGAGTTCCATCTCAGAAACACAAACAGGACAGAATCAATTATGAAATCATTATCAGCAGTGGATGAAAAGGGTTCTCAAGATTATAATAGATTGCCTTCCAATTACTTTGCAGCAGCAAGATTGGACCTAAACTCACATGGAGGAGATAGCACTGTTAACAATAATGAAGCTGCAACAACGACTTGTAAACAACTTGACTTGAACAGATTCAGTTGGAACTAA 1287 0.4297 MYHHHQGKSMHSSSSRMAIPSERHMFLQAGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNNMTHKITTNVGATTTERLPEPNGTQMNKLSLVPQPNKDIHISEALQMQIEVQRRLNEQLEVQRHLQVRIEAQGKYLQSVLEKAQETLGRQNLGVVGLEAAKVQLSELVSKVSSQCLNSAFSEMKELQGFCPQQAQQTSLPNDCSMDSCLTSCEGSQKEQEIQNGGVGLRHLNGHSFMERKEAAIEAHNNLRNNKSEIRWCDEVKKNSFLTPLGRNAERGSYVAERSTSNLSMTIGLDRETENHSDGGEFHLRNTNRTESIMKSLSAVDEKGSQDYNRLPSNYFAAARLDLNSHGGDSTVNNNEAATTTCKQLDLNRFSWN* 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2170 428 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 102 IPR017930 -
Aev10g2170 428 Coils Coil 150 170 - -
Aev10g2170 428 PANTHER MYB-RELATED PROTEIN 2 3 428 - -
Aev10g2170 428 Pfam MYB-CC type transfactor, LHEQLE motif 147 194 IPR025756 -
Aev10g2170 428 Pfam Myb-like DNA-binding domain 47 98 IPR001005 -
Aev10g2170 428 Gene3D - 44 102 - -
Aev10g2170 428 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 428 IPR044848 GO:0003700
Aev10g2170 428 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 45 100 IPR006447 GO:0003677
Aev10g2170 428 SUPERFAMILY Homeodomain-like 44 100 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2170 Aev-Chr10 22169959 22172123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2170 77 428 G2-like Transcription Factor Family AT3G04030 51.268 3.13e-99 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev10g2170 Myb_DNA-binding 3.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2170 - - gmx:100810396 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2170 10 22169959 22172123 Aev04g2851 04 28223999 28227283 PCT