Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2157 ATGGAGAATCATCATCATCCCCCAACTGGCTTTCGATTCTACCCAACAGAGGAAGAGCTTGTTGGCTTCTACCTACAGAGCCAGCTTGATGGCCAAAGAAATGACATCAACAGGGTTATACCAGTCCTTGACATCAATGGCATAGAGCCTTGGAACCTTCCACCACTAGCAGGGGAGTTGTGTCGTGGAGAAACAGAGCAATGGTTTTTCTTTGCGCCAAGGCAAGAGAGGGAATCAAGAGGGGGAAGGATCAACAGAACAACTGCTTCTGGGTATTGGAAAGCGACGGGTTCTCCAGGCTATGTCTACTCTTCTGACAACAAGGTCATTGGTGTTAAGAAAACTATGGTGTTTTACAAAGGCAGAGCTCCCTCTGGAAGGAAAACCAAGTGGAAGATGCATGAATACAGAGCCATTCATCAACTCCCTAACCAATCCATCACAGCAATTCCTAAGTTGAGGCACGAATTCAGCCTGTGTCGTGTTTATGTCATATCCGGGAGCTTTCGGGCATTCGACCGGCGGCCACCTGAGGTGGCGCCAAGAGTGGTGGGGCTGAGAGGTGAAGGCTCTTCATCAAGTGCTCATCAGCAAAATGAAGGAGCATCAATGATGGTAGCCAATGAAAATGATGGGTCAAGCTCATCACCTGAAACTTCACATTCACCCGGAGGAGGAGACCAAAGTGGTGGTGGTGCTGCCAATTGGAATGATGCAAGTGGTGGAGGTGATGTAGAAGAACCTCTGTCTCTATGGGAATGGGAACAACTCAACTGGCTCTAG 783 0.4866 MENHHHPPTGFRFYPTEEELVGFYLQSQLDGQRNDINRVIPVLDINGIEPWNLPPLAGELCRGETEQWFFFAPRQERESRGGRINRTTASGYWKATGSPGYVYSSDNKVIGVKKTMVFYKGRAPSGRKTKWKMHEYRAIHQLPNQSITAIPKLRHEFSLCRVYVISGSFRAFDRRPPEVAPRVVGLRGEGSSSSAHQQNEGASMMVANENDGSSSSPETSHSPGGGDQSGGGAANWNDASGGGDVEEPLSLWEWEQLNWL* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2157 260 Gene3D NAC domain 16 168 IPR036093 GO:0003677|GO:0006355
Aev10g2157 260 Pfam No apical meristem (NAM) protein 8 137 IPR003441 GO:0003677|GO:0006355
Aev10g2157 260 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 8 259 - -
Aev10g2157 260 MobiDBLite consensus disorder prediction 206 226 - -
Aev10g2157 260 SUPERFAMILY NAC domain 4 163 IPR036093 GO:0003677|GO:0006355
Aev10g2157 260 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 8 259 - -
Aev10g2157 260 ProSiteProfiles NAC domain profile. 7 165 IPR003441 GO:0003677|GO:0006355
Aev10g2157 260 MobiDBLite consensus disorder prediction 206 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2157 Aev-Chr10 22124493 22125469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2157 9 259 NAC Transcription Factor Family AT3G44350 53.360 1.01e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g2157 NAM 4.4e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2157 - - gmx:100780264 329.331
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2157 10 22124493 22125469 Aev10g2157 10 22124493 22125469 ECH
Aev10g2157 10 22124493 22125469 Aev04g2838 04 28131153 28134178 PCT