Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2140 ATGAAGCGCCAACACACCGTTCCTTCCACCAAGCCGCCCTTCGGTCCTACCGGGGATTACCATCGCTTCGCTCCCGATCACCGCACAACTCCTCAAAACGACGCCGATGCCATTATCGTTAAAACTCCTGAATTAAAGCGGAAGAGTGATGCAACTGAATTTGAAGCTGATTCTGGTGACAGGATGGCTCCTGCTTCCACTGAAGCAGCTAATAGCCCTTTTCAGACGCCTATGTCAAGAAAGACAGGGAAGGCAAGCAAAGCCCCAAGACTTACAAAATGCAACAGATCTGGACCTCAAATCCCACACTTAAATATTGGTTCACCTTCAGGAAATATTCTCACTCCTGCTGGTCCATGTCGTTACGACAGCTCTTTAGGCCTGTTGACAAAGAAGTTCATCAATTTGATCAAACAAGCTGAGGATGGTATTCTTGATTTGAATAAAGCTGCTGACACATTGGAGGTACAAAAGAGGAGGATATATGATATTACAAATGTTCTTGAAGGGATTGGCCTTATAGAAAAGAAACTAAAGAACAGAATTCAGTGGAAGGGCCTGGATGTTTCAAGGCCTGGGGAGGCTGATGATAGTTTTCCTAGTTTACAGGCTGATATTGAACGTCTTACAATGGAGGAGCGGCAGTTAGATGACCAAATAAGAGAGATGCAAGAAAGGCTAAGGGATCTTAGTGAAGATGAAAATACTCAAAAGCATCTTTTTGTCACTGAGGAAGATATAAAGAGCTTGCCCTGCTTCCAGAATGAAACCTTGATAGCAATTAAAGCTCCACATTGCACCACTTTGGAGGTCCCTGATCCTGATGAGGCTGTCGACTATCCTCAGAGGAGATACAGGATAGTCTTGAGAAGCACAATGGGCCCAATAGATGTTTACCTTCTTAGTCAATTTGAAGAAAACTTTGAGGATATTAATGAGGTTGATGCGGGGCCCAATCTTCCATCCAGTCCAGTGGTCTCACAGGATAGAGGGAAAGACCTTGAAATGAAGGGACAAGATGCTTACAGGCCTGATCCAGATTTCTCTATCTCGCAGGACTTAGTGAGTGGGATCATGAAGATTGTTCCTTCAGATTTTGATAGCGATGCTGATTACTGGCTCTTATCTGATGCTGATGTTAGCATAACAGACATGTGGAGAACAGAACCCGAAGTTGAATGGGACAATCTGAATTCTCTTAAAGAAGAGTATGCTTTGAGTCATGTCAGCCCACCGCCTCCCCAAACTCCTCCCTCGAATGTGAGCGAAGTGCCATCGACATCTAACCCTGCTGCAGGTTGA 1302 0.4478 MKRQHTVPSTKPPFGPTGDYHRFAPDHRTTPQNDADAIIVKTPELKRKSDATEFEADSGDRMAPASTEAANSPFQTPMSRKTGKASKAPRLTKCNRSGPQIPHLNIGSPSGNILTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDSFPSLQADIERLTMEERQLDDQIREMQERLRDLSEDENTQKHLFVTEEDIKSLPCFQNETLIAIKAPHCTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLLSQFEENFEDINEVDAGPNLPSSPVVSQDRGKDLEMKGQDAYRPDPDFSISQDLVSGIMKIVPSDFDSDADYWLLSDADVSITDMWRTEPEVEWDNLNSLKEEYALSHVSPPPPQTPPSNVSEVPSTSNPAAG* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2140 433 PANTHER TRANSCRIPTION FACTOR E2FB 2 428 - -
Aev10g2140 433 CDD E2F_DD 201 303 IPR032198 GO:0046983
Aev10g2140 433 SMART E2F_TDP_2 121 186 IPR003316 GO:0005667|GO:0006355
Aev10g2140 433 MobiDBLite consensus disorder prediction 1 107 - -
Aev10g2140 433 PANTHER TRANSCRIPTION FACTOR E2F 2 428 IPR015633 GO:0000978|GO:0006357
Aev10g2140 433 MobiDBLite consensus disorder prediction 68 82 - -
Aev10g2140 433 SUPERFAMILY "Winged helix" DNA-binding domain 121 184 IPR036390 -
Aev10g2140 433 Coils Coil 206 240 - -
Aev10g2140 433 SUPERFAMILY E2F-DP heterodimerization region 200 302 IPR037241 -
Aev10g2140 433 MobiDBLite consensus disorder prediction 406 433 - -
Aev10g2140 433 MobiDBLite consensus disorder prediction 40 57 - -
Aev10g2140 433 Pfam E2F transcription factor CC-MB domain 202 301 IPR032198 GO:0046983
Aev10g2140 433 Pfam E2F/DP family winged-helix DNA-binding domain 123 186 IPR003316 GO:0005667|GO:0006355
Aev10g2140 433 Gene3D - 115 188 IPR036388 -
Aev10g2140 433 Coils Coil 137 157 - -
Aev10g2140 433 Gene3D - 194 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2140 Aev-Chr10 22048099 22052351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2140 2 405 E2F-DP Transcription Factor Family AT5G22220 55.251 4.76e-142 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Aev10g2140 E2F_CC-MB 3.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2140 K06620 - gmx:100819817 651.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2140 10 22048099 22052351 Aev10g2140 10 22048099 22052351 ECH