Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2127 ATGGCAACGTACTTTCATGGAGGCACTTCTGAGATCAATAATTCATCTTCCTCTCCTTCTCCTCATGCCGATGGGTTGCAGACACTTTACCTTATGAACCCAAACAACTACCACGCGCCTTACTCTGACGCGCCTCATCACCACACACCACCAACGCCCAACATGCTTCTCCTCAATCCCAACGCACCTCCTCCTCACGCGCTCAACCTCGCTCACCTCTCCCACGCGCCGCCACTTCCATCCCCCAACCAACACCAACACCAACACCTCGCAAACATCCTTGCATCCGCCAACTCCGAAGACCACTCACGCCCCTCGCTCTTCGGACCCCACGAGATCACCGCCGCCTTCCACGGCTTCTCCCCCGCCCCGCGCGTGCACTATAACCTATGGGGCTCAGTAGTCGACCAAACTCAACAGTCTTCCGCGGCAGCGACACCGTCAAGCAGCTCGGCCGGTGGCGGAGATGTGTCGCCGCAGATGGACTTCCGGCGGCCTAGTCAGCAGGGCTTATCTCTGAGCCTCTCGTCACAACAACAAAGAACAGTTAACTATAGGTCTCTCTCCGGCGAGATTGTCGGTAACTCGCCGTCGTCGGCGTCGAACGGGATCTCGAGCGTGCAGAGCGTAATCTTGGGGTCCAAGTATTTGAAAGCCGCGCAGGAGCTTCTGGATGAGGTTGTGAACGTCGGTAATAATAATAAGAAGGAGGAGTTGGGAGAGAAGGTGAAGGGGAATAGAGAGTCCAATTCCGGTGGTGTTGGTGATGGTTCCAGTGGCGGCGGCGGCGGCGAGAACAGTGATGCAGGGGGGAAGCATGTTGCTGAACTCACCACTGCACAGAGACAAGAGCTTCAGATGAAGAAATCCAAGCTTGTCAGCATGCTTGATGAGGTAGAGCAGAGGTACAGGCAATACCACCAGCAAATGCAAATAGTGGTATCATCATTTGAGCAAGCGGCGGGTTATGGAGCGGCGAAATCATACACAGCACTTGCCCTAAAGACAATATCGAAGCAGTTTCGGTGCCTGAAAGATGCAATATCCTCACAGATAAGAGGAACGAGCAAGACTCTGGGTGAGGAGGATCCTAACTGTTTGGGAGTGAAAGTGATGGAAGGTGGGTCTAGGCTTAGGTACGTTGACCACCATCTTCGGCAGCAAAGGGCTTTGCAGCAACTCGGAATGATTCAGCCTAATGCTTGGCGCCCACAGAGGGGCTTGCCTGAGAGAGCCGTTTCTATTCTCCGTGCTTGGCTTTTTGAGCATTTCCTTCACCCGTATCCTAAGGACTCCGATAAAGTCATGCTCGCAAAGCAAACTGGTCTTACCAGGAGCCAGGTGTCAAACTGGTTTATCAATGCCCGAGTTCGGTTGTGGAAACCAATGGTTGAAGAAATGTACTTGGAAGAAACGAAGGAGCAAGAGCATAAGAACAACAGCAATAATATGAGATCAACATCTAATAACCCCACGGATGAATCAGGTGACGTCATCAAGCTTGATCAGATCAAAATTCCGCAATCAAACCAACAAGAAATATTCTTCAACCACCAAAACACTAGTGCCTCTCCCACCGAGATCTCAGGAAATTCTTCAATGTCCACTTCTCCCAACATGGGAGGAGGAGGTGGTGGCTTCCATCTTGTTGGAGTAGGATCCTCTGACAAGGCTGCTAGGAGAACTATTACTACTACTTCAGAAATAATGTTGAACTCTCCAAGTAGTATCCTTTCCGTCGACATGGAAATCAAACATCATCACAACCACACAAATCATAATAATAAGTTCATTGGGATTATTGATCAGAGTCACACCAAAGATGGATACCCTTTAATGACGGGAATAAGCCCAAACCATGGTGGTGGTGGTGGTGGTTTTGGTGGTTTCTCAATGGAAGACATGATTGGAAGCAGCAGGTTCAATAATAATGTCACTGATCATCAATTGGCTTCTTCCACTAGGTTCCAAGGAAATAGTGTTTCCCTCACTTTGGGGCTTCCCCACAATAACAATGAGAATCTATCAATCTCAGGAACTCCACCTCCTCATCAACAACATGCTGGGTTTCTTTCACAGAATATTCACAATTTGGGAAGGAGGCTTGAGATTGGTGGGACCAATAACAACAATGGGAATAATGAGTTCTGTGTCATCAACACTGCTCCTCCACCATCTCACTCAGCATCTTATGAGACCACCATTGACATTCAGAACACAAAGAGGTTTGCTGCACAGTTATTGCCTGATTTTGTGGCATGA 2262 0.4929 MATYFHGGTSEINNSSSSPSPHADGLQTLYLMNPNNYHAPYSDAPHHHTPPTPNMLLLNPNAPPPHALNLAHLSHAPPLPSPNQHQHQHLANILASANSEDHSRPSLFGPHEITAAFHGFSPAPRVHYNLWGSVVDQTQQSSAAATPSSSSAGGGDVSPQMDFRRPSQQGLSLSLSSQQQRTVNYRSLSGEIVGNSPSSASNGISSVQSVILGSKYLKAAQELLDEVVNVGNNNKKEELGEKVKGNRESNSGGVGDGSSGGGGGENSDAGGKHVAELTTAQRQELQMKKSKLVSMLDEVEQRYRQYHQQMQIVVSSFEQAAGYGAAKSYTALALKTISKQFRCLKDAISSQIRGTSKTLGEEDPNCLGVKVMEGGSRLRYVDHHLRQQRALQQLGMIQPNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEETKEQEHKNNSNNMRSTSNNPTDESGDVIKLDQIKIPQSNQQEIFFNHQNTSASPTEISGNSSMSTSPNMGGGGGGFHLVGVGSSDKAARRTITTTSEIMLNSPSSILSVDMEIKHHHNHTNHNNKFIGIIDQSHTKDGYPLMTGISPNHGGGGGGFGGFSMEDMIGSSRFNNNVTDHQLASSTRFQGNSVSLTLGLPHNNNENLSISGTPPPHQQHAGFLSQNIHNLGRRLEIGGTNNNNGNNEFCVINTAPPPSHSASYETTIDIQNTKRFAAQLLPDFVA* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2127 753 SMART prehox3 205 350 IPR006563 -
Aev10g2127 753 Coils Coil 282 309 - -
Aev10g2127 753 MobiDBLite consensus disorder prediction 139 179 - -
Aev10g2127 753 Pfam Associated with HOX 210 349 IPR006563 -
Aev10g2127 753 SMART HOX_1 402 466 IPR001356 GO:0003677
Aev10g2127 753 MobiDBLite consensus disorder prediction 238 271 - -
Aev10g2127 753 MobiDBLite consensus disorder prediction 472 495 - -
Aev10g2127 753 CDD homeodomain 402 463 IPR001356 GO:0003677
Aev10g2127 753 SUPERFAMILY Homeodomain-like 403 468 IPR009057 -
Aev10g2127 753 MobiDBLite consensus disorder prediction 481 495 - -
Aev10g2127 753 Gene3D - 405 485 - -
Aev10g2127 753 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 10 686 - -
Aev10g2127 753 MobiDBLite consensus disorder prediction 1 27 - -
Aev10g2127 753 ProSiteProfiles 'Homeobox' domain profile. 399 462 IPR001356 GO:0003677
Aev10g2127 753 Pfam Homeobox KN domain 419 458 IPR008422 GO:0003677|GO:0006355
Aev10g2127 753 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 10 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2127 Aev-Chr10 21955105 21959273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2127 1 753 Homeobox Transcription Factor Family AT2G35940 43.742 4.58e-136 416
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aev10g2127 POX 2.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2127 - - gmx:100779075 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2127 10 21955105 21959273 Aev04g2799 04 27797035 27803873 PCT