Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2126 ATGGGCGAAATCGAAGTTCCTCAATTTTTCCTATGTCCCATTTCGCTTGAAATCATGAAGGACCCCGTGATCACCGTGACAGGCATAACATACGACAGGGAAAGCATCGAGCACTGGCTCCTAACAGCCAAAGATTGTGTCTGTCCCGTTACAAAGCAACCATTGCCGAGAACCTCGGATTTTTTGACGCCGAACCACACGCTCCGGAGGCTGATCCAAGCGTGGTGTTCGGCGAACGAGTCCAATGGTCTCGACCCGATTCCGACCCCAAGACTGCCTCTGGACGTATCTCAAGTCCAGAGGCTCCTCAAGGATCTTGAGATTCCTCGTAGCTTTGAAGCCACATTGGAGAAGATGCATGGTCTAGCCGCCGAAAGCGAGAGGAACAGAAGGTGCATGGCTGAAGCAGGGGTAGCTAAAGCCATGGTTAACCTCATCATAAGGAGTTTCAAGCATGGTAAGAGCACGTGCCTTGAAGAAGCTCTAAGAATTCTTCATCTACTGTGCAGCACTACATCATCCATGGCCGGCAACAACATGAAGAAGGCCATGGTAGGTGAAACCTTAGACTTCATCAACTCCTTGAGTTGGATTTTCCAACTTCAAACGGACAACAATGACATCATGGTCAACGAAGCAATGACAATACTAAAGTTGACAATCGAACTCACTGACTCAACCCTCTTAGGAAGCTTAACTCACGAATTCTTCACACAAATCATCAATAAGGTAATAAGAAACAGAGCAATTTCTCAGCAAGCCATAAAATCCTCCTTACATGTCCTCATAGAAACGTGCCCTTTGGGAAGAAATAGGACAAAGATTGTGGAATCAGGCGCAGTCACAGAACTCATAGAACTCGCACTTGAAAACCAAGAGAAGAGCCTAACAGAGCTAATTTTCAACGTTCTGGGCCAACTCTGTTCTTGTGCTGATGGCAGAGAACAGTTTCTGAAGCACTCTGCGGGAATCGCGCTTCTCTCTAAGAGGACTCTGAGGGTTTCCCCTGCCACCGATGACAGAGCACTTCACATACTCTCGCTGATAGCGAAATTCTCGGCGTCGAATGAGGTTGTTCAAGAGATGCTCAGAGTTGGGGCTGTTTCGAAGCTCTGCATGGTGATGCAAGCAGATTGTGCTTCCTATTTGAAAAATAAGGCACGCGAGATTCTAAGGTTGCACTCCAAAGCTTGGAATAATTCTCCTTGTATTCAACTTTATTTGTTAACCAGACACCAAAGCTGA 1245 0.4675 MGEIEVPQFFLCPISLEIMKDPVITVTGITYDRESIEHWLLTAKDCVCPVTKQPLPRTSDFLTPNHTLRRLIQAWCSANESNGLDPIPTPRLPLDVSQVQRLLKDLEIPRSFEATLEKMHGLAAESERNRRCMAEAGVAKAMVNLIIRSFKHGKSTCLEEALRILHLLCSTTSSMAGNNMKKAMVGETLDFINSLSWIFQLQTDNNDIMVNEAMTILKLTIELTDSTLLGSLTHEFFTQIINKVIRNRAISQQAIKSSLHVLIETCPLGRNRTKIVESGAVTELIELALENQEKSLTELIFNVLGQLCSCADGREQFLKHSAGIALLSKRTLRVSPATDDRALHILSLIAKFSASNEVVQEMLRVGAVSKLCMVMQADCASYLKNKAREILRLHSKAWNNSPCIQLYLLTRHQS* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2126 414 SUPERFAMILY RING/U-box 4 85 - -
Aev10g2126 414 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 1 412 - -
Aev10g2126 414 SMART Ubox_2 9 75 IPR003613 GO:0004842|GO:0016567
Aev10g2126 414 PANTHER WDSAM1 PROTEIN 1 412 IPR045185 GO:0061630
Aev10g2126 414 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 84 IPR013083 -
Aev10g2126 414 Gene3D - 96 399 IPR011989 -
Aev10g2126 414 Pfam U-box domain 6 80 IPR003613 GO:0004842|GO:0016567
Aev10g2126 414 ProSiteProfiles U-box domain profile. 5 82 IPR003613 GO:0004842|GO:0016567
Aev10g2126 414 SUPERFAMILY ARM repeat 107 400 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2126 Aev-Chr10 21945465 21947125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2126 3 404 U-box Gene Family AT2G35930 42.015 5.31e-103 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2126 - - gmx:100778547 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2126 10 21945465 21947125 Aev10g2126 10 21945465 21947125 ECH
Aev10g2126 10 21945465 21947125 Aev04g2797 04 27785923 27788334 PCT