Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2125 ATGGATGAAATTGATGTTCCTGCCCATTTCCTCTGCCCAATCTCCCTTCAACTAATGAGAGATCCTGTCACGGTTTGCACTGGAATCACTTATGACAGAGACAACATAGAGAGATGGTTATTCTCATGCAAGAACAACACTTGCCCTGTCACAAAACAGTCCCTATTAGCCACAGATCTCACCCCAAACCATACTCTAAGAAGGTTGATCCAATCTTGGTGCACCCTTAATGCTTCTCTAGGAGTTGAAAGAATTCCTACTCCAAAGCCACCCATTGACACAGCACAGATTCTGAAGCTCCTCTCTGAAGCAAACAACTTCCCTGAGAAGCGACTCAAGACCCTTAGAAGGCTTAGATCAATTGCATTTGAGGGTGAAAGGAACAAGAGCTGTTTGGAATCTGCAGGGGCAATAGAATTCTTGGCATCAACAATGAAGAGCATCAACAATAGCATTATCAGCAATTTACAAGATGATTCAACTGTTCTTCTCATCAGTGAAGCTGCTATTGAAGTCTTGTTTCACCTAAACCCTTCTGAGAAGCATCTCAAGAGCCTAATCAACAAAGAGGGAATTCAGTTTCTTGAGTCATTGTTCCAAGTTTTGAGGCTTGGGAACTACCAATCAAGAGCCTTTGCAACTATGCTGCTGAAATCAGCATTTGGTGTGGCTGATCCAATCCAATTGCTGAGTGTGAAAAAAGAACTCTTTGTCGAGATAATGAGATTGCTGAATGATAAGATTTCACAGCAGGCTTCTAAGGCTGCACTGAAGCTGGTGGTGGAGCTATGTCCATGGGGCAGAAACAGAATCAAAGCAGTTGAGGGAGGTTCTGTTTCGGTCCTCATCGAGCTACTCCTCGATGCGGCCGAAAGAAGGGCTTGTGAGCTTATTCTGATAGCATTGGATCAGCTTTGTGGCTGTGCAGAAGGGCGTGCAGAGTTGTTGAACCATGCTGCAGGATTGGCCATTGTGTCCAAGAAAATCTTGAGGGTGTCTCATGTGGCAAGTGATAGAGGGGTTAGGATTTTGGCCTCCATTTGTAGGTACTCTGCAACTTTAAGGGTACTCCATGAAATGCTGCAAGTTGGGGCAGTGTCTAAGTTGTGTTTGGTTCTTCAAGTTGATAGTGGTTTCAAGACCAAGGAGAGGGCAAAGGAGATTCTCAAGCTGCACTCTTCAGTTTGGAAGAATTCACCTTGTATTCCTCTGCCTCTGCTATCATCCTATCCTTGA 1236 0.445 MDEIDVPAHFLCPISLQLMRDPVTVCTGITYDRDNIERWLFSCKNNTCPVTKQSLLATDLTPNHTLRRLIQSWCTLNASLGVERIPTPKPPIDTAQILKLLSEANNFPEKRLKTLRRLRSIAFEGERNKSCLESAGAIEFLASTMKSINNSIISNLQDDSTVLLISEAAIEVLFHLNPSEKHLKSLINKEGIQFLESLFQVLRLGNYQSRAFATMLLKSAFGVADPIQLLSVKKELFVEIMRLLNDKISQQASKAALKLVVELCPWGRNRIKAVEGGSVSVLIELLLDAAERRACELILIALDQLCGCAEGRAELLNHAAGLAIVSKKILRVSHVASDRGVRILASICRYSATLRVLHEMLQVGAVSKLCLVLQVDSGFKTKERAKEILKLHSSVWKNSPCIPLPLLSSYP* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2125 411 SUPERFAMILY ARM repeat 97 389 IPR016024 -
Aev10g2125 411 SUPERFAMILY RING/U-box 3 77 - -
Aev10g2125 411 PANTHER WDSAM1 PROTEIN 1 411 IPR045185 GO:0061630
Aev10g2125 411 SMART Ubox_2 9 73 IPR003613 GO:0004842|GO:0016567
Aev10g2125 411 Pfam U-box domain 6 75 IPR003613 GO:0004842|GO:0016567
Aev10g2125 411 PANTHER OS11G0573500 PROTEIN 1 411 - -
Aev10g2125 411 ProSiteProfiles U-box domain profile. 5 80 IPR003613 GO:0004842|GO:0016567
Aev10g2125 411 CDD RING-Ubox_PUB 10 53 IPR045210 -
Aev10g2125 411 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 82 IPR013083 -
Aev10g2125 411 Gene3D - 89 400 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2125 Aev-Chr10 21940656 21941891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2125 2 411 U-box Gene Family AT2G35930 54.831 2.17e-162 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2125 - - gmx:100778012 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2125 10 21940656 21941891 Aev10g2125 10 21940656 21941891 ECH
Aev10g2125 10 21940656 21941891 Aev04g2796 04 27780796 27782013 PCT