Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2112 ATGTCATCAATGGACAGCATGATGGTAACCGAACGAGTTTGTTATGTTTACTGCAACTTCTGCAACACCACTCTAGCGGTTAGTGTTCCATGCAACAGCTTGCTGACCATAGTGACAGTGAGATGCGGGCATTGTGCAAATCTGCTATCAGTGAACATGGGAGGAGGAGGAGCAGCAGCATCTCTTCAAACATTGCCTCCTCATCACCAAGACCCTCAGTCACAGAGACAGAACGTGATGAACTTCCAACATGAACCAAGCAGCAAGGAACATGGATCATCATCTTCAAAATACAACAAATCGTCAGCACCAGCATCGTTTGAGACTGTAGTAGATCATGACCAACCTAGGATTCCTCCCATTCGTCCTCCTGAGAAGAGACAACGTGTTCCTTCTGCTTATAATCGGTTCATTAAAGAGGAAATCCAAAGAATTAAGGCTAGTAATCCTGACATCAGCCACAGGGAAGCTTTCAGCACAGCTGCCAAAAACTGGGCACATTTCCCTCACATTCACTTTGGGCTAAAGCTGGATGGGAACAAACAAGCAAAGTTGGACCATGGTGGTGGGGAGGGAGCTCACCAAAAGTCTAACGGATTCTATTGA 606 0.4604 MSSMDSMMVTERVCYVYCNFCNTTLAVSVPCNSLLTIVTVRCGHCANLLSVNMGGGGAAASLQTLPPHHQDPQSQRQNVMNFQHEPSSKEHGSSSSKYNKSSAPASFETVVDHDQPRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQAKLDHGGGEGAHQKSNGFY* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2112 201 PANTHER AXIAL REGULATOR YABBY 2-RELATED 8 201 - -
Aev10g2112 201 Pfam YABBY protein 10 175 IPR006780 GO:0007275
Aev10g2112 201 MobiDBLite consensus disorder prediction 83 108 - -
Aev10g2112 201 SUPERFAMILY HMG-box 118 168 IPR036910 -
Aev10g2112 201 PANTHER PROTEIN YABBY 6-RELATED 8 201 IPR006780 GO:0007275
Aev10g2112 201 MobiDBLite consensus disorder prediction 83 130 - -
Aev10g2112 201 Gene3D High mobility group box domain 114 170 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2112 Aev-Chr10 21842867 21850374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2112 10 201 C2C2-YABBY Transcription Factor Family AT1G08465 62.694 2.25e-77 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Aev10g2112 YABBY 6.8e-72 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2112 K25796 - gmx:100785458 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2112 10 21842867 21850374 Aev04g2777 04 27615107 27621708 PCT