Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2109 ATGCCTCTCCGCCATAAAACCATCAAGGCGGTGGCGCCGTCTCAACCTCCGCCTCTGCCGCCGAGACAGCGGACCCGCAAGCGCGAGGTCGCCGGCGTAGCGACAGCAGACTGCGCGGTGGTGTGCTGCTGCATGCCGTGCGCGGTGATGGACCTGGTGGTCCTGGCGGCGTACAAGGTTCCGGCGGGGCTGGTGAAGAAGGCGATAGGAAAGAAGGAGCGGCGGCGACGGAAGAAGATAGCGACGAAGGGGGTTCTCTTGCAGAGGAAGCAGCCAGTGGAGGTGCATGTGGAGAAAGAGCAAAACGGCGTCGTTGAGAGGAAGGTGGGACCCACGCTCCTCGAGGAGCATCTGGCGGAAGATTTAGAGGCCGTTGAGATGGAAGAGGAGATGTGGGCCCAGTTTTACGGAACGGGATTCTGGAGAAGCCCTTCCCAACGACTCAACGAACATCAGCTTCTGATAACGAGTGAGGAATCATCATCGAATCAGCTTCCTCAATTCTTCATGGAGGGTGCTCCTGGAATGGAAGAGAGTGCCAAGTCTGAGGCGCATTTGACTTCAGCTGCTGCTTTTGTTGAAGGTGGAATTCAGGATGCTTGCGATGATGCTTGCAGCATCTGTCTAGAAGCTTTCTGTGATAGTGATCCTTCCACCGTGACAAGCTGCAAGCACGAGTTTCATCTTCAATGCATTCTGGAATGGTGTCAGAGAAGTTCCCAGTGCCCGATGTGTTGGCAACCCATCAGTCTCAAAGATCCATCCAGCCAGGAATTGCTTGAGGCTGTGGAAAGAGAGAGAAACTTTAGGCTCAATCCACCTAGAAACACAACAATATTTCATCATCCGACTCTGGGGGATTTTGAGTTGCAACATTTGCCAGTTGGAGCTAATGATGCTGATCTTGAAGAGCATATAATCCAACACTTGGCTGCTGCTGCAGCAATGGGGCGAGCACGTCACATTGCTAGAAGGGAAGGCCAGAGAAACAGGTCGTCAGCTCAAGGCCGCCCACATTTTTTGGTATTTTCAACTCATCCAAATTCACCTCCTGTGGCTCCTGCTTCTTCCTCTCCTACTCACAGCCAGGGGGTGGATGGTGAACCAACTCCTGCAGTTGCTGTTGCCACTCTGTCTCCCACTCCTACACCTGGAGAAGAAATGCCACAGCCAACTTTAGTTCTTCCTGGTCAAGCTGACCAGGTCTCTGCTTCGGGTTCTGGGTCTACTAGCACTACTAATCATCAGGGGCCATCTAACCATAATAGGAGATCTCCAAGCCATTCGTCTCCAAGTAGTCAAGACAGAGCAGGGCCATCAGAATTCCAGTCATTTTCAGAATCTCTGAAATCTAAACTAAATGCTGTGTCAACAAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGGTGGAAGGAGAGATGGTTCTCTCGTAACACCTCTATGTCTGATCTTGGATCTGAAGTCAGACGAGAAGTTAATGCTGGGATTGCAAGTGTGTCACGTATGATGGAACGCCTTGAAACCAGGGACAGTAATAGAAGCAGTAGCAATGTTGCACCAAGTAATTTGGATGATGCTTCAATTCAGGGAGCAAGTGATCAGCATTTAACAGATACTGAAGGAAGCCGGATTTTGAGAGACGACAACACAAAAGCATCTTGTGCTGCAGGTAGAAATAGAATTGTTTGTTCGTTTGAAGATACTAGTAAATTACGTGGATGTGATTCCTTGCCTATTATTCTCTGGCTGGCTCAGAAGATGACCAACAATTCTGATGTTGGAAGAACAAACTGCTCTCTTTTGTTGTAA 1812 0.4978 MPLRHKTIKAVAPSQPPPLPPRQRTRKREVAGVATADCAVVCCCMPCAVMDLVVLAAYKVPAGLVKKAIGKKERRRRKKIATKGVLLQRKQPVEVHVEKEQNGVVERKVGPTLLEEHLAEDLEAVEMEEEMWAQFYGTGFWRSPSQRLNEHQLLITSEESSSNQLPQFFMEGAPGMEESAKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCWQPISLKDPSSQELLEAVERERNFRLNPPRNTTIFHHPTLGDFELQHLPVGANDADLEEHIIQHLAAAAAMGRARHIARREGQRNRSSAQGRPHFLVFSTHPNSPPVAPASSSPTHSQGVDGEPTPAVAVATLSPTPTPGEEMPQPTLVLPGQADQVSASGSGSTSTTNHQGPSNHNRRSPSHSSPSSQDRAGPSEFQSFSESLKSKLNAVSTRYKESISKSTRGWKERWFSRNTSMSDLGSEVRREVNAGIASVSRMMERLETRDSNRSSSNVAPSNLDDASIQGASDQHLTDTEGSRILRDDNTKASCAAGRNRIVCSFEDTSKLRGCDSLPIILWLAQKMTNNSDVGRTNCSLLL* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2109 603 MobiDBLite consensus disorder prediction 1 25 - -
Aev10g2109 603 MobiDBLite consensus disorder prediction 349 365 - -
Aev10g2109 603 SMART ring_2 205 245 IPR001841 -
Aev10g2109 603 MobiDBLite consensus disorder prediction 396 446 - -
Aev10g2109 603 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RHF2A 157 558 - -
Aev10g2109 603 MobiDBLite consensus disorder prediction 340 446 - -
Aev10g2109 603 MobiDBLite consensus disorder prediction 513 539 - -
Aev10g2109 603 ProSiteProfiles Zinc finger RING-type profile. 205 245 IPR001841 -
Aev10g2109 603 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 157 558 - -
Aev10g2109 603 Pfam Ring finger domain 204 245 IPR001841 -
Aev10g2109 603 MobiDBLite consensus disorder prediction 507 545 - -
Aev10g2109 603 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 159 250 IPR013083 -
Aev10g2109 603 SUPERFAMILY RING/U-box 198 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2109 Aev-Chr10 21820205 21825763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2109 202 253 C3H Transcription Factor Family AT4G00335 44.231 1.53e-10 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2109 K19043 - gmx:100814908 611.298