Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2097 ATGGGAAACTTCAAGAGACTTGAGTCTGTCTTGGTTTTGGTGATGCTGCTTGTGGCATGTGCAAGTGGAGAGGACCCTTATAGGTTCTACACTTGGAATGTCACCTATGGAGACATCTATCCTCTTGGAGTTAAACAACAGGGGATATTGATAAATGGGCAGTTCCCAGGGCCGCAGATCGAATCTGTGACCAATGATAACTTGATCATCAATGTTTACAACAGCTTGGATGAACCTTTCCTTATCTCTTGGAATGGAGTGCAGCAGAGGAGGAATTCATGGCAGGATGGAGTGTATGGCACCAACTGTCCAATCCCACCAGGGAGGAACTTCACTTATGTTCTTCAAGTTAAAGATCAGATTGGTAGCTACTTTTACTTCCCTTCCCTTGCATTTCACAAGGCAGCTGGGGGCTATGGTGGCTTCAAAATCGCCAGCCGATCCGTGATTCCGGTACCTTTCCCTCCTCCGGCAGGAGACTTCACTGTATTGGCAGGGGACTGGTACAAGAGAAACCACTCAGATTTGAGGGCCATTTTAGACAGTGGGAGTGACCTTCCTTTCCCTGATGGTTTAATCATCAATGGCCGTGGTTCCAATGCATACACATTCAATGTTGATCAAGGAAAAACATACAGGTTCAGGATATCAAATGTGGGGCTTACTACTTCCATCAACTTCAGAATCCAAGGGCATAAGATGCTGCTTGTTGAGGTGGAAGGAATCCACACTCTCCAGAACACTTATGACTCCCTTGATATTCATTTGGGGCAGAGTTACTCTGTTTTGGTTACTGCTGATCAGCCACCACAAGACTACTACATTGTTGTCTCCACTAGATTCACTTCCCAAGTGTTGAGTGCTACCTCCATTCTTCACTATAGTAACTCGGCTGGAACCGTTTCTGGCCCTCCCCCCGGAGGACCGACGACTCAAATCGATTGGTCTCTCGAACAAGCTCGCTCTCTAAGGCGGAATCTGACAGCCAGTGGACCAAGGCCTAATCCACAAGGATCATACCATTATGGTTTGATAAACACAACCCGAACAATCAGGCTTCAAAGTTCTGCACCAATTATCAATGGCAAGCAGAGATATGCTGTCAACAGTGTTTCCTTCATCCCTGCTGATACACCACTCAAACTTGCTGATTACTTCAAGATCTCAGGGGTGTTCAGCCTCGGAAGTATCCCGGACAACCCCACCGGCAGCGGCGGTTACCTCCAGACCTCTGTCATGGCTGCAGACTTCCGCGCCTACGTGGAGATTGTGTTTGAGAATCCTGAAGACACTGTGCAATCATGGCACATTGATGGCCACAACTTCTTTGTTGTAGGAATGGATGGAGGGCAATGGTCAGATGCAAGCAGGTTAAATTACAATTTGAGAGACACAATTTCTCGCTGCTCAGTTCAGGTGTATCCGAAATCATGGAGCGCAGTGTACATGCCATTGGACAGTGTTGGTATGTGGAATGTGAGGTCTGAGAATTGGGCGCGACAATATTTGGGACAACAATTTTATCTTCGAGTGTATTCTGCTGCCAACTCGTGGAGAGATGAGTACCCTATCCCTAGTAATGCCTTGTTATGTGGTCGTGCTGTGGCACAAAGTGGGAGCGCTCTTTTTTCACTCCCGAACGGTTTTCCCTTCTCTTTCTCTCTCTATTTTTTTCTTATTCTCTCTCGTGATCCTTCTGGAATTCTTCGATCGGAAAACCCTAAGACTCTCTCTCTCTCCGCGTCGCGTGTCTCAATGGAGCTTCGTCCTCGTCGACGCCGTTCCAATGCTACAGTATCTGGGAATGAACAGCTGGCTGAGGAGGCCGTTGGAGAAGTTGAACCTGATGGCCAGTGTAGCAATGTTAAGGATGCAGATGTTTATGCTATATCTCCTGATTCTGATTCAGATTCATATTCAGATTCAGATTCAGATTCTCATTCGGATTCAGACGCAAGTTATGAAGGTTTGATTGGTGGCTTGAATTATGATCCAAGTTTAAGCATTAGTGTTTCTGATTCTTCTGATGGTGACAAGCCTTCATCTAAACGGAAAAAGTTGCAATCCAGCAAGAAAATAAGCACCGATGCAGAAAATGTAAAACCAATTGATATTGATAGAGTGGTGGAGCATGGAGATAAGGATGAACACTCAGTGCTTCAGCAGGAATCAGTTTCCCAGGATTTGACTGGAATTAAAAAGAAGAAATATGGCAAAAAAGGGAAAAAGGAGGATCCAGTGTTATTGTGGCATAATTGGGAAGAGGATCAAGAGAGATGGATTGATGAGAAATTATTAGAAGATGCTAACTTAGAGAATCAGAGTGAAGTAATAACTGAAACTGCTGAGGCATCCTCTGATCTGACTATGCCTCTGCTTAGATACCAAAAGGAATGGTTAGCCTGGGCTTTGAAACAGGAAAATTCTGCAACTAGAGGTGGAATCCTTGCAGATGAAATGGGAATGGGAAAGACAATTCAAGCAATAGCCCTTGTACTTGCGAAACGTGAATTGCAGTGTAGTAGTTCTGTACCAGCTGAACCCCTAATATCAGAGTCACCATGCTCATCTAAGGCCTTGCCTATGATCAAAGGAACACTGGTCATCTGTCCTGTGGTTGCTGTCACTCAGTGGGTTAGTGAGATCGATCGATTTACTATGAAAGGAAGCACCAGGGTGCTGGTTTATCATGGCGCAAGGAGAGGAAAGAGTGGTGAACAGTTCTCGGAGTATGATTTTGTGATTACTACATACTCTATTGCTGAGTCTGAGTACAGGAAGTACATGATGCCTCCTAAAGAGAAGTGTCCATACTGTAGAAAATCATTTCTGCCGAGTAAGTTATCTTATCATCAGATGTATCATTGTGGGCCTTTTGCTGCCAGAACAGAAAAGCAATCAAAGCAAGTTAAGAAAAAAACAGAAGTCACTGAAGGGAATAACAAGGAACGTGTGAGTAACAAGATGTCTTCGAATGAAAATGAGCTTAGTATAGGCATGGAAAATTCAGATGCTATACGCAGGGGTATGTCACTTTTACATGCTGTTAAGTGGCAGCGGATTATATTGGATGAGGCACACTATATAAAATCTAGACATAGTAACACTGCAAGAGCAGTTCTTACTTTAGAGTCTTCATACAAATGGGCATTAAGTGGTACTCCTCTTCAGAACCGTGTTGGAGAGCTGTATTCTCTGGTACGGTTCCTTCAAATAACTCCTTATTCATACTACTTGTGCAAGGACTGTGATTGCAGGACTCTTGATCATAGCTCCAAACAATGTCCAGACTGCACCCACAGTTCTATTCGACACTTCTGTTGGTGGAACAAATATGTTTCCAATCCAATTCAATCCTTTGGGAATAGTGATATTGGAAAAAGAGCTATGATATTGCTTAAACACAAAGTTCTGAAGAATATAATACTACGGCGCACTAAACTAGGCAGGGCAGCTGATCTCGCACTTCCTCCAAGAATTATTCTATTGAGAAAGGATTGCCTGGATATAAAAGAGCAAGACTATTACGAATCATTGTACAATGAAAGCCAGGCCCAATTTAATACATATGTTCAGGCAAATACACTGCTGAACAATTATGCTCATATATTTGATCTGCTAACAAGGCTGCGTCAGGCTGTTGATCATCCATACCTTGTGGTTTATTCTCAAGCTGCAGCACTAAGAGGTGTTCATGTGGCTGGTAATGCTACTGTTGAACATGCATGTGGCATTTGTCATGAACCAGTAGAAGATTCTGTGGTTACCTCTTGTGAGCATATATTTTGCAAGGCCTGCTTGATAGACTTCTCTGCTTCTTTGGGACAAGTGTCATGCCCCTCATGCTCTCAATTACTTACTGTTGATTTAACTTCCAACAAGGAAGTTGGTGATCAGGCTAATAAAACTACAGTTAAGGGTTTCAGATCCTCAAGCATTTTAAACAGAATTCAGCTTGATAACTTTCAGACAAGCACTAAAATAGAGGCTTTGCGAGAAGAAATAAGATCAATGGTTGAAAGAGATGGTTCTGCCAAAGGGATTGTTTTTAGCCAATTCACATCATTCTTGGATCTCATAAACTACTCTTTGCATAAGTCTGGAGTGTCTTGCGTTCAATTGAATGGAAGCATGACGTTAGCCGCCCGGGATGCTGCGATTAAGAGATTTACTGATGATCCAGACTGCAAAATTTTTCTCATGAGCTTGAAGGCTGGAGGTGTTGCGCTCAATTTGACTGTAGCTTCACATGTTTTCCTCATGGATCCTTGGTGGAACCCCGCTGTGGAGCGTCAGGCTCAAGACAGAATTCACCGAATCGGGCAATATAAACCCATAAGAATTGTGAGATTTGTAATTGAGAACACCATTGAGGAGAGGATTCTGAAGCTGCAAGAGAAGAAAGAACTAGTTTTTGAAGGGACTGTTGGCGGCTCTACCGACGCACTGGGGAAACTAACAGAGGGAGACTTGAGATTTCTATTTTCTATCTAG 4494 0.4352 MGNFKRLESVLVLVMLLVACASGEDPYRFYTWNVTYGDIYPLGVKQQGILINGQFPGPQIESVTNDNLIINVYNSLDEPFLISWNGVQQRRNSWQDGVYGTNCPIPPGRNFTYVLQVKDQIGSYFYFPSLAFHKAAGGYGGFKIASRSVIPVPFPPPAGDFTVLAGDWYKRNHSDLRAILDSGSDLPFPDGLIINGRGSNAYTFNVDQGKTYRFRISNVGLTTSINFRIQGHKMLLVEVEGIHTLQNTYDSLDIHLGQSYSVLVTADQPPQDYYIVVSTRFTSQVLSATSILHYSNSAGTVSGPPPGGPTTQIDWSLEQARSLRRNLTASGPRPNPQGSYHYGLINTTRTIRLQSSAPIINGKQRYAVNSVSFIPADTPLKLADYFKISGVFSLGSIPDNPTGSGGYLQTSVMAADFRAYVEIVFENPEDTVQSWHIDGHNFFVVGMDGGQWSDASRLNYNLRDTISRCSVQVYPKSWSAVYMPLDSVGMWNVRSENWARQYLGQQFYLRVYSAANSWRDEYPIPSNALLCGRAVAQSGSALFSLPNGFPFSFSLYFFLILSRDPSGILRSENPKTLSLSASRVSMELRPRRRRSNATVSGNEQLAEEAVGEVEPDGQCSNVKDADVYAISPDSDSDSYSDSDSDSHSDSDASYEGLIGGLNYDPSLSISVSDSSDGDKPSSKRKKLQSSKKISTDAENVKPIDIDRVVEHGDKDEHSVLQQESVSQDLTGIKKKKYGKKGKKEDPVLLWHNWEEDQERWIDEKLLEDANLENQSEVITETAEASSDLTMPLLRYQKEWLAWALKQENSATRGGILADEMGMGKTIQAIALVLAKRELQCSSSVPAEPLISESPCSSKALPMIKGTLVICPVVAVTQWVSEIDRFTMKGSTRVLVYHGARRGKSGEQFSEYDFVITTYSIAESEYRKYMMPPKEKCPYCRKSFLPSKLSYHQMYHCGPFAARTEKQSKQVKKKTEVTEGNNKERVSNKMSSNENELSIGMENSDAIRRGMSLLHAVKWQRIILDEAHYIKSRHSNTARAVLTLESSYKWALSGTPLQNRVGELYSLVRFLQITPYSYYLCKDCDCRTLDHSSKQCPDCTHSSIRHFCWWNKYVSNPIQSFGNSDIGKRAMILLKHKVLKNIILRRTKLGRAADLALPPRIILLRKDCLDIKEQDYYESLYNESQAQFNTYVQANTLLNNYAHIFDLLTRLRQAVDHPYLVVYSQAAALRGVHVAGNATVEHACGICHEPVEDSVVTSCEHIFCKACLIDFSASLGQVSCPSCSQLLTVDLTSNKEVGDQANKTTVKGFRSSSILNRIQLDNFQTSTKIEALREEIRSMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVSCVQLNGSMTLAARDAAIKRFTDDPDCKIFLMSLKAGGVALNLTVASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFVIENTIEERILKLQEKKELVFEGTVGGSTDALGKLTEGDLRFLFSI* 1498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2097 1497 Gene3D - 343 539 IPR008972 -
Aev10g2097 1497 CDD CuRO_3_AAO_like_1 375 497 IPR034275 GO:0005507
Aev10g2097 1497 PANTHER BNAA08G28190D PROTEIN 734 1494 - -
Aev10g2097 1497 SUPERFAMILY Cupredoxins 154 334 IPR008972 -
Aev10g2097 1497 Gene3D - 794 936 IPR038718 -
Aev10g2097 1497 CDD SF2_C_SNF 1325 1452 - -
Aev10g2097 1497 CDD CuRO_2_AAO_like_1 159 294 IPR034271 -
Aev10g2097 1497 Pfam SNF2-related domain 806 1220 IPR000330 GO:0005524|GO:0140658
Aev10g2097 1497 SMART ring_2 1243 1282 IPR001841 -
Aev10g2097 1497 Gene3D - 955 1162 IPR038718 -
Aev10g2097 1497 Gene3D - 27 148 IPR008972 -
Aev10g2097 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1017 1496 IPR027417 -
Aev10g2097 1497 MobiDBLite consensus disorder prediction 677 698 - -
Aev10g2097 1497 Gene3D - 1167 1495 IPR027417 -
Aev10g2097 1497 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 750 1145 IPR027417 -
Aev10g2097 1497 MobiDBLite consensus disorder prediction 589 698 - -
Aev10g2097 1497 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 20 - -
Aev10g2097 1497 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 734 1494 - -
Aev10g2097 1497 ProSitePatterns Zinc finger RING-type signature. 1258 1267 IPR017907 -
Aev10g2097 1497 SUPERFAMILY RING/U-box 1234 1287 - -
Aev10g2097 1497 MobiDBLite consensus disorder prediction 967 982 - -
Aev10g2097 1497 CDD CuRO_1_AAO_like_1 29 145 IPR034273 GO:0005507
Aev10g2097 1497 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1327 1487 IPR001650 -
Aev10g2097 1497 Pfam Multicopper oxidase 378 513 IPR011706 GO:0005507|GO:0016491
Aev10g2097 1497 SMART ultradead3 788 1091 IPR014001 -
Aev10g2097 1497 Pfam Helicase conserved C-terminal domain 1327 1441 IPR001650 -
Aev10g2097 1497 CDD DEXDc_SHPRH-like 792 1145 - -
Aev10g2097 1497 Pfam Zinc finger, C3HC4 type (RING finger) 1243 1282 IPR018957 GO:0046872
Aev10g2097 1497 Pfam Multicopper oxidase 160 296 IPR001117 -
Aev10g2097 1497 ProSiteProfiles Zinc finger RING-type profile. 1243 1283 IPR001841 -
Aev10g2097 1497 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 805 1073 IPR014001 -
Aev10g2097 1497 Gene3D - 159 333 IPR008972 -
Aev10g2097 1497 MobiDBLite consensus disorder prediction 967 993 - -
Aev10g2097 1497 Pfam Multicopper oxidase 34 147 IPR011707 GO:0005507
Aev10g2097 1497 SUPERFAMILY Cupredoxins 344 533 IPR008972 -
Aev10g2097 1497 SUPERFAMILY Cupredoxins 24 174 IPR008972 -
Aev10g2097 1497 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1237 1314 IPR013083 -
Aev10g2097 1497 SMART helicmild6 1358 1441 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2097 Aev-Chr10 21736321 21747784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2097 734 1496 RAD5 or RAD16-like Gene Family AT1G05120 66.883 0.0 1063
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Aev10g2097 SNF2_N 4.1e-49 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2097 K15083 - gmx:100786366 1300.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2097 10 21736321 21747784 Aev10g2097 10 21736321 21747784 ECH