Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2083 ATGAAGCGGTTCATCGTTTCTCACCTTGTGATTTGGACCATCTTTTGTGGTGTTGCTCTATGCAATAGGCCAGCCAGTGTGAACATTGGGGCAGTCTTCACTTTCGATTCGGTCATAGGAAGAGTTGCCAAGGTGGCCATGGAAATGGCCGTTGCTGATGTAAATGCTGACCCAAGTGTTCTCAATGGGACGAAACTTCAGTTGATAGAGCAGGATGCCAGTTGCAGTGTCTTTCTGGGATCAATTGGAGCTTTTCAGGCACTCGAGAAAGGGCTTGTAGCCATAGTTGGTCCACAGTCATCTGCCATAGCTCATATGATTTCTCAAATTGCCGATGCTCTCCAAGTGCCTCTTGTTTCATATGGCGCCACTGATCCAACCATGTCCTCCCTTCAGTTTCCTTTCTTTTTTCGTACCGTACAAAGTGACTGGGAGCAAATGACTGCAATGGCTGAACTAATTGATTTTCAGGAATGGAAAGAGGTCATTGCTGTGTACTTGGATGATGATTATGGGAGAAACGGAATAGCTTCTTTGAGGGATGAGCTTGAGAAAAGGAGATTGAGAATTTCTCATAAACTACCTTTGAGTATTCAGTTCGACCCAAACGAAATCACCAACTTGCTCAATCAATCCAAAGTGTTCGGCCCTCGTGTGTATGTCGTTCATATTAATGCAGATCCAAGATTGAGATTTTTTAACATTGCCCACAACCTTAAAATGATGACCAAGGACTATGTCTGGCTTGTCACAGATTGGCTCTTTGCTACCTTGGATTCATTATACCCAGTGAATCAGACCTCTCTCAGTGTTCTCCAAGGGGTTGTTGGTTTTCGTCAACACATTCCAGCCTCCAGAAAAATGAGAGCTTTTGCTTCTCGATGGACAAAAATGCAAAAAGAAGGTCTTACAAATACTAGTCTGAATGCTTATGGATTTTATGCCTACGATACAATTTGGGTAGTTGCACATTCAATTGCCAGATTCATTGAGATACATGATAATATTACCTTCTCTGTGAACGATAACCTTCCTCATACAGAAGGACCTAGTCTTCAGCTTGACAAGCTCAAAGTCTTTGCTGGTGGAAATGATCTGAATAACATAATATTGCAATCAAATTTTACTGGTTTGAGTGGTCAGCTTCAGTTTAACTCGGAGAGAAATCTCATAAGTGGTGGTTATGATGTTATAAATATCAAACAAATGGGAATCACTAGGGTAGGTTATTGGTCTAATTCTTCAGGATTTTCAGTTGTACCCCCCAAAATTCTTACAAGTAAACAAAATAAAAGGGTTCTGGGTGATCAGAAGCTTGGCAATATTACTTGGCCAGGTGGACAAACAGGAAGACCACGCGGCTGGGTGATTGCCGATAATGGGAGACCACTGAGAATTGGAGTACCAAAGAGAGCCAGTTTTGTTGAGTTTGTGACTGAACTGCCAGATCATCAAATTCAGGGGCACTGCATCGATATCTTCAAGAAAACCCTAGAATTTATTCCATATGAAGTTCCTTATGTGTTCAAGCCTGTTGGCAATGGTAAAGAAAATCCAAACTATGATGCACTTGTGAAAAGGATTGCTGAAAATGTATATGATGCAGTTGTTGGAGACATTGCAATTGTGACAAATCGTACAAAGATTGTGGATTTTTCTCAGCCCTTTGCAACATCTAGCCTTGTTATAGTGGCTCCTATCAACAGTGCAGGATCAAATGCTTGGGTTTTTATCCAACCATTTACAGCAGATATGTGGTGCGCTACTGCTGCTTCGTTTGTGATAATTGCAGTGGTTATATGGATTCTTGAGCACCGAGTAAATGACGAGTTCCGTGGTCCTCCTAAGAGGCAACTGGTGACAATGTTTATGTTCAGTCTCTCAACACTGTTTAAGGCAAATCAGGAACAGACTGTAAGCTCACTATCCAAAATGGTGATGATTGTATGGCTTTTCCTATTGATGGTTATCACAGCTAGCTATACAGCAAGCTTGACTTCAATTCTTACAGTGGAGAAGCTCTCATCACCCATCACAGGAATTGATAGCTTGATTGCGAGTAACTGGCCTATCGGATTCCAAGTTGGGTCATTTGCTTACTCCTATTTGACAGATAATCTTTATGTACCAGGATCACGGCTTGTTCCCCTAGGCAATCCTGACGAATACGCTATAGCCCTACGGAAGGGACCATATGGTGGAGGGGTGGCAGCCATCATTGATGAGCTTCCATATATGGAGTTATTTCTGTCAAAACATAAAGATTTCGGTATCATTGGACAGCCATTTGCCAAAAGCAGTTGGGGATTTGCATTTCAAAGAGAATCTCCTCTTGCACTTGACATTTCAACAGCAATTCTGAAACTCTCAGAGAGTGGCGAACTCCAGAAGATACATGACAAGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAATGAAAACCAACTCTGAGCCTGACCAACTTCACCTGATTAGCTTTTGGGGTCTGTATCTCTCATGTGGTGTTGTCACCCTTGCTGCATTTGTGCTGTTCCTGCTGCGAACGATATGCCAGTATGCTCGGTTCAAACAAAAGCAAAAGGATGTTCCTTCCTCCTCGTCGCCACCACCAAGCAGTCATTGCTCCCAGGTTTTTGTTAGCTTCTTCAATTTCATTGATGAGAAGGAAGAGGCCATCAAGAAAATGTTCACCCAAAGTACTGACAATCATGAACCCCAAGTGAGGTAG 2727 0.4243 MKRFIVSHLVIWTIFCGVALCNRPASVNIGAVFTFDSVIGRVAKVAMEMAVADVNADPSVLNGTKLQLIEQDASCSVFLGSIGAFQALEKGLVAIVGPQSSAIAHMISQIADALQVPLVSYGATDPTMSSLQFPFFFRTVQSDWEQMTAMAELIDFQEWKEVIAVYLDDDYGRNGIASLRDELEKRRLRISHKLPLSIQFDPNEITNLLNQSKVFGPRVYVVHINADPRLRFFNIAHNLKMMTKDYVWLVTDWLFATLDSLYPVNQTSLSVLQGVVGFRQHIPASRKMRAFASRWTKMQKEGLTNTSLNAYGFYAYDTIWVVAHSIARFIEIHDNITFSVNDNLPHTEGPSLQLDKLKVFAGGNDLNNIILQSNFTGLSGQLQFNSERNLISGGYDVINIKQMGITRVGYWSNSSGFSVVPPKILTSKQNKRVLGDQKLGNITWPGGQTGRPRGWVIADNGRPLRIGVPKRASFVEFVTELPDHQIQGHCIDIFKKTLEFIPYEVPYVFKPVGNGKENPNYDALVKRIAENVYDAVVGDIAIVTNRTKIVDFSQPFATSSLVIVAPINSAGSNAWVFIQPFTADMWCATAASFVIIAVVIWILEHRVNDEFRGPPKRQLVTMFMFSLSTLFKANQEQTVSSLSKMVMIVWLFLLMVITASYTASLTSILTVEKLSSPITGIDSLIASNWPIGFQVGSFAYSYLTDNLYVPGSRLVPLGNPDEYAIALRKGPYGGGVAAIIDELPYMELFLSKHKDFGIIGQPFAKSSWGFAFQRESPLALDISTAILKLSESGELQKIHDKWFCKMGCPEEMKTNSEPDQLHLISFWGLYLSCGVVTLAAFVLFLLRTICQYARFKQKQKDVPSSSSPPPSSHCSQVFVSFFNFIDEKEEAIKKMFTQSTDNHEPQVR* 909
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2083 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 231 254 - -
Aev10g2083 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 40 56 - -
Aev10g2083 908 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 100 128 - -
Aev10g2083 908 Gene3D - 576 701 - -
Aev10g2083 908 PIRSF IGluLR_plant 1 908 IPR017103 -
Aev10g2083 908 Pfam Bacterial extracellular solute-binding proteins, family 3 465 803 IPR001638 -
Aev10g2083 908 Gene3D - 751 810 - -
Aev10g2083 908 SUPERFAMILY Periplasmic binding protein-like II 442 803 - -
Aev10g2083 908 PANTHER GLUTAMATE RECEPTOR 3.7 12 903 - -
Aev10g2083 908 SUPERFAMILY Periplasmic binding protein-like I 22 455 IPR028082 -
Aev10g2083 908 CDD GluR_Plant 462 803 - -
Aev10g2083 908 Gene3D - 45 393 - -
Aev10g2083 908 CDD PBP1_GABAb_receptor_plant 28 421 IPR044440 -
Aev10g2083 908 Gene3D - 142 417 - -
Aev10g2083 908 Pfam Ligand-gated ion channel 804 835 IPR001320 GO:0015276|GO:0016020
Aev10g2083 908 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 903 - -
Aev10g2083 908 Pfam Receptor family ligand binding region 45 401 IPR001828 -
Aev10g2083 908 SMART GluR_14 465 805 IPR001320 GO:0015276|GO:0016020
Aev10g2083 908 Gene3D - 459 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2083 Aev-Chr10 21646561 21651143 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2083 21 905 Ion Channels AT2G32400 55.157 0.0 1010
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2083 K05387 - gmx:100796389 1410.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2083 10 21646561 21651143 Aev10g2083 10 21646561 21651143 ECH
Aev04g2718 04 26968148 26973187 Aev10g2083 10 21646561 21651143 PCT