Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2079 ATGCCAGCGGGTATGATGATTCCGAGTAGAAACATGATGATACCCTCCGCTGCTATGATTGCAAGGAACGGATTTGGCTCATCTTCTTCTTCTTCTTCACCCGGATTCTCTCTTGCCCAGATTGAGAGCCTTAAGGGTTCGGAGAGTCAGAGATCGGGAGACATAATGTTCCAACAGAACATGATGGAAGGAGGTCAGCTGCACCATCTGGACATGGGACAGAACAACACGCCGGAGAGCGATGTGCCTCGAATCCGCGAGGATGAGTTCGACAGTGCCACAAAATCGGGAAGCGAGAACCAAGAAGCTGCCTCCGGCGAAGACCAAGACCCTCGCCCTAAGAAGAAGCGCTACCACCGCCACACCCAGCACCAGATCCAGGAAATGGAAGCTTTCTTTAAGGAATGTCCACACCCTGATGACAAGCAAAGGAAGGAATTGAGCCGTGAGTTAGGGTTAGAGCCATTGCAAGTCAAGTTTTGGTTTCAGAACAAGCGCACTCAGATGAAGACACAACATGAGAGGCACGAGAACACTCAGCTAAGGACAGAAAACGAGAAGCTGAGAGCGGATAACATGAGGTACAGAGAAGCTCTTAGCAATGCCTCATGTCCCAACTGTGGCGGACCAACCGCTATTGGAGAAATGTCCTTTGATGAGCATCACTTGCGCCTTGAAAATGCTCGCCTCCGAGAAGAGATTGATAGGATATCAGCCATTGCTGCAAAGTACGTGGGGAAGCCAGTGGTGAACTACCCACTCCTTTCATCCTCCTCATCAGTTCCACCGCGCCCACTTGAACTCGGCATTGGCGGCGGCTTCGGTGGCCAGCCAGGTGGCATGGGTGGCGGCGGCAGTGACATGTACGGAGGAGCTGGCAGTGATCTTCTGAGGTCAATCAGTGGCCCCACGGATGCAGACAAACCAATGATAATAGAGCTGGCGGTTGCAGCCATGGAGGAGCTGATTGGGATGGCACAGATGGGTGAGCCTCTATGGCTGACCACTCTGGATGGAAACACAGTGCTGAACGAGGATGAGTATGTCAGGTCATTTCCCCGTGGCATTGGACCTAAACCTGCCGGCTTCAAGTGCGAAGCTTCTAGAGAAACTGCTGTTGTCATCATGAACCATGTTAACCTTGTTGAGATTCTCATGGATGTGAACCAATGGGCCACAGTGTTCTCTGGCATAGTGTCAAGAGCCATGACTCTGGAAGTCCTATCAACTGGTGTTGCGGGGAACTACAACGGTGCCTTGCAAGTGATGACAGCAGAATTACAAGTGCCGTCACCATTAGTGCCAACAAGAGAGAGTTACTTTGTGCGGTACTGCAAGCAGCACGCGGACGGGACATGGGCAGTGGTGGATGTGTCGCTGGACAATCTGCGGCCTAGCCCTTCAGCAGCTGCGAGATCCAGCAGGAGAAGGCCTTCTGGTTGCTTAATCCAAGAAATGCCCAATGGCTACTCCAAGGTGGTATGGGTGGAGCATGTTGAGGTCGATGATAGAGGTGTTCACGCTCTGTACAAGCCCCTTGTTTCCTCTGGACATGCTTTCGGTGCTAAACGCTGGATTGCTACCTTGGATCGGCAGTGCGAAAGGCTTGCCAGTGCTATGGCCACTAACATTCCCACCCTCGATGTTGGAGTGATCACTAACCAAGAAGGGAGGAAGAGTATGTTGAAGCTGGCGGAGAGAATGGTGATAAGCTTTTGCGCTGGAGTGAGTGCTTCTACTGCCCACACATGGACTACACTCTCCGGAACAGGCGCTGATGATGTCAGGGTCATGACCCGCAAGAGTGTTGATGACCCTGGTAGGCCTCCTGGTATTGTTCTCAGTGCTGCTACTTCCTTTTGGCTCCCTGTCCCACCTAAAAGGGTCTTTGAATTCCTACGTGATGAGAACTCCAGGAGTGAGTGGGACATTCTTTCGAATGGTGGAGTTGTCCAAGAAATGGCACACATAGCTAATGGAAGAGATACCGGAAATTGTGTCTCTCTACTTCGAGTCAATAGTGCGAATTCAAGCCAAAGCAACATGCTGATATTACAAGAGAGTTGCACGGATTCAACGGGGTCATTCGTAATCTACGCGCCAGTGGATATTGTAGCCATGAATGTGGTTCTTAATGGAGGGGACCCAGATTACGTGGCGCTTCTACCTTCAGGGTTTGCAATACTCCCCGATGGAGGAGGAGGTAGCGGTGGTGACGGTGGCCACGGCGGTGGATCTCTTCTTACTGTTGCATTCCAGATACTGGTTGACTCTGTTCCAACGGCTAAGCTCTCTCTTGGCTCTGTTGCTACTGTCAACAATCTCATTGCTTGCACCGTTGACCGAATTAAGGCTTCTTTGTCTGGAGCAGAACCTGCTCCTAATTGA 2388 0.5134 MPAGMMIPSRNMMIPSAAMIARNGFGSSSSSSSPGFSLAQIESLKGSESQRSGDIMFQQNMMEGGQLHHLDMGQNNTPESDVPRIREDEFDSATKSGSENQEAASGEDQDPRPKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYPLLSSSSSVPPRPLELGIGGGFGGQPGGMGGGGSDMYGGAGSDLLRSISGPTDADKPMIIELAVAAMEELIGMAQMGEPLWLTTLDGNTVLNEDEYVRSFPRGIGPKPAGFKCEASRETAVVIMNHVNLVEILMDVNQWATVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQVPSPLVPTRESYFVRYCKQHADGTWAVVDVSLDNLRPSPSAAARSSRRRPSGCLIQEMPNGYSKVVWVEHVEVDDRGVHALYKPLVSSGHAFGAKRWIATLDRQCERLASAMATNIPTLDVGVITNQEGRKSMLKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFEFLRDENSRSEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDSTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGGGGSGGDGGHGGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVDRIKASLSGAEPAPN* 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2079 795 SUPERFAMILY Homeodomain-like 105 172 IPR009057 -
Aev10g2079 795 ProSiteProfiles 'Homeobox' domain profile. 112 172 IPR001356 GO:0003677
Aev10g2079 795 CDD homeodomain 115 173 IPR001356 GO:0003677
Aev10g2079 795 Gene3D - 99 189 - -
Aev10g2079 795 Coils Coil 178 198 - -
Aev10g2079 795 ProSitePatterns 'Homeobox' domain signature. 147 170 IPR017970 GO:0000981|GO:0006355
Aev10g2079 795 SMART HOX_1 113 176 IPR001356 GO:0003677
Aev10g2079 795 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 71 789 - -
Aev10g2079 795 SMART START_1 313 535 IPR002913 GO:0008289
Aev10g2079 795 Pfam START domain 314 535 IPR002913 GO:0008289
Aev10g2079 795 Pfam Homeodomain 115 170 IPR001356 GO:0003677
Aev10g2079 795 SUPERFAMILY Bet v1-like 304 537 - -
Aev10g2079 795 MobiDBLite consensus disorder prediction 90 123 - -
Aev10g2079 795 SUPERFAMILY Bet v1-like 554 784 - -
Aev10g2079 795 MobiDBLite consensus disorder prediction 24 51 - -
Aev10g2079 795 CDD START_ArGLABRA2_like 308 534 - -
Aev10g2079 795 Gene3D - 360 529 IPR023393 -
Aev10g2079 795 ProSiteProfiles START domain profile. 304 538 IPR002913 GO:0008289
Aev10g2079 795 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 71 789 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2079 Aev-Chr10 21627636 21632366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2079 56 788 Homeobox Transcription Factor Family AT1G05230 77.537 0.0 1157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Aev10g2079 START 2.3e-56 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2079 K09338 - gmx:100809556 1319.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2079 10 21627636 21632366 Aev10g2079 10 21627636 21632366 ECH
Aev10g2079 10 21627636 21632366 Aev04g2715 04 26938039 26945485 PCT