Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2075 ATGAACGACCTTCTTAGTGATTCATTTGTTGGTGAGGCTAATCATGGTCAGCCTTCTAGACAAGGTGATATTGAAATGGGAATGCAGGTTCAGAGAAGCAACTCTGATTTGGGAATGGAAGCTTTTAATAAGCAGATCCAAGATGCTGATAAACAAATTGATAAGCTCTCCGGACTACTTCAAAAGTTGAAGGAAGCCAATGAGGAATCAAAGTCTGTTACAAAAGCAGCTGCCATGAAAGCTATCAAAAAGAGGATGGAAAAAGATATTGATGACGTTGGAAAGATTGCACATGGTGTCAAAACGAAAATAGAAGCCATAAACAGAGATAACCTAAACAATAGAAAGAAGCCTGGGTGTGAGAAAGGGACTGGCGTTGACAGAGCAAGGATGAATATGACAAACTCATTAACTAAGAAGTTCAAGGATCTAATGACAGAGTTTCAGACTCTCAGACAAAGAATACAAGATGAATATCGTGAGGTTGTCGAGAGGAGAGTTATTACAGTCACGGGTACTAGGCCAGATGATGAGACAATTGACCGCCTGATTGAAACTGGAAATAGTGAGCAAATCTTCCAGAAGGCAATTCTAGAATCAGGCCGAGGACAGGTTGTAAGCACAGTAGAAGAAATTCAGGAGAGACATGATGCTGTGAAAGAAATAGAGAAAAAGCTTCTTGATTTACACCAGATTTACCTTGACATGGCAGTCTTAGTTGATGCTCAAGGAGAAATCTTAGACAACATCGAAAGTCAGGTGACAAACGCAACTGATTTTGTGAGAGTTGGTAACGACGCTCTCAAAACTGCAAAGAGTTTGCAGAAGAGGTCAAGGAAGTGCATGATGATATCCATCATACTGCTCCTCATCATTGCAGCCATCATCGTACTCTCTGTTTTGAAGCCATGGAAGAAGTGA 921 0.4072 MNDLLSDSFVGEANHGQPSRQGDIEMGMQVQRSNSDLGMEAFNKQIQDADKQIDKLSGLLQKLKEANEESKSVTKAAAMKAIKKRMEKDIDDVGKIAHGVKTKIEAINRDNLNNRKKPGCEKGTGVDRARMNMTNSLTKKFKDLMTEFQTLRQRIQDEYREVVERRVITVTGTRPDDETIDRLIETGNSEQIFQKAILESGRGQVVSTVEEIQERHDAVKEIEKKLLDLHQIYLDMAVLVDAQGEILDNIESQVTNATDFVRVGNDALKTAKSLQKRSRKCMMISIILLLIIAAIIVLSVLKPWKK* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2075 306 Pfam SNARE domain 245 297 IPR000727 -
Aev10g2075 306 Coils Coil 39 76 - -
Aev10g2075 306 Gene3D - 203 302 - -
Aev10g2075 306 Gene3D - 34 163 - -
Aev10g2075 306 SUPERFAMILY t-snare proteins 37 263 IPR010989 GO:0016020|GO:0016192
Aev10g2075 306 PANTHER SYNTAXIN 10 301 IPR045242 -
Aev10g2075 306 CDD SNARE_syntaxin1-like 208 270 - -
Aev10g2075 306 MobiDBLite consensus disorder prediction 1 26 - -
Aev10g2075 306 SMART tSNARE_6 204 271 IPR000727 -
Aev10g2075 306 PANTHER SYNTAXIN OF PLANTS 122 PROTEIN 10 301 - -
Aev10g2075 306 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 209 271 IPR000727 -
Aev10g2075 306 CDD SynN 39 196 IPR006011 GO:0016020
Aev10g2075 306 SMART SynN_4 34 160 IPR006011 GO:0016020
Aev10g2075 306 Pfam Syntaxin 42 244 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2075 Aev-Chr10 21594084 21599109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2075 1 304 SNARE and Associated Proteins AT3G03800 60.855 2.91e-117 338
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2075 K08486 - gmx:100807404 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2075 10 21594084 21599109 Aev10g2075 10 21594084 21599109 ECH