Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2049 ATGCACGTAACGCATAGCATGAAAGCAGAGTTGAAGGGCACGCCCTCAATCTCCTTCCAAAACCACACCACTCTCTTCAACACACCGCACAACAATCCTCTAACAGGGGCACTCAAAGGGTGTCTTGGAAGCCTAGATGGAGCATGCATTGAGAAGCTCTTGCTCCACTGTGCAAGTGCCTTGGAGAGCAATGATGTAACTCTGGCTCAGCAAGTCATGTGGGTCCTAAACAACGTTGCCTCCCCTGCCGGTGACACAAACCAGAGGCTCACATCTTGGTTCCTCAGGGCACTCATCTCAAGGGCTTCAAGGATTTGCCCCACAGCCATGAATTTCAAAGGAAGCAACACCATTCAGAGGAGGCTGATGACTGTGACAGAGTTAGCAGGGTATGTTGATCTGATTCCTTGGCATAGGTTTGGATTCTGTGCATCAAACAATGAGATTTTCAAGGCAATTGTTGGCTTCCAAAAGGTACATATCTTAGATTTGAGCATCACTCATTGTATGCAGTGGCCTACTTTTATTGATGCTTTGGCCAAAAGGCCTGAGGGACCTGCTTATCTCAGAATCACGGTTCCCTGTGTTAGGCCACCGGTGTCTCCCTTGGTCAATATATCCACACAAGAGATTGGAATCAGGTTAGCGAATTTTGCTAAGTTTAGAGATGTCCCTTTTGAATTCAATATTATAGGGAACACAATAAATCCATTAACACCTTCTGAATTAAGCAATGAATCAAGTAGCTTTCATTTCGAGTCACTGTTAAGTCTATTGAATCCTAATGTGCTAAACCTTAGAGATGATGAGGCTTTGGTCATAAACTGCCAAAATTGGCTTCGGTATTTGTCTGATGATAGAAAGGGAAGCCTCCAAAACCTTTGTCTCCGTGATGCTTTTCTGAATCTAGTTAAGGGCCTTAACCCCAGGATAGTGATGTTGGTAGATGAGGATTGTGATCTTGGTTCACCAAGCCTCACATCAAGAATCACAACATGTTTCAACCATCTGTGGATACCCTTCGATGCATTGGAGACATTTTTACCTAAGGGCAGTTGCCAGAGGACAGAATTCGAATCCGACATAGGGCAGAAGATTGAGAACATAATAGGCTTTGAAGGAGATCAGAGGATAGAGAGGTTGGAGTCAGGGATGCAAATGTGCCAGAGAATGAGGAGTGCTGGTTTCTTGAGCCTCTCATTCTGTGATGAAACAGTTAGGGAAGTTAAGGCATTGCTTGATGAGCATGCTAGTGGATGGGGTATGAAGAGGGAAGAAGGAATGTTGGTTCTCACATGGAAAGGAAACAGCTGTGTGTTTGCCACAGCTTGGGTCCCCACTGAAATGAGGGATCATTTGGGCATAGATACATGCATATCTTAA 1383 0.4476 MHVTHSMKAELKGTPSISFQNHTTLFNTPHNNPLTGALKGCLGSLDGACIEKLLLHCASALESNDVTLAQQVMWVLNNVASPAGDTNQRLTSWFLRALISRASRICPTAMNFKGSNTIQRRLMTVTELAGYVDLIPWHRFGFCASNNEIFKAIVGFQKVHILDLSITHCMQWPTFIDALAKRPEGPAYLRITVPCVRPPVSPLVNISTQEIGIRLANFAKFRDVPFEFNIIGNTINPLTPSELSNESSSFHFESLLSLLNPNVLNLRDDEALVINCQNWLRYLSDDRKGSLQNLCLRDAFLNLVKGLNPRIVMLVDEDCDLGSPSLTSRITTCFNHLWIPFDALETFLPKGSCQRTEFESDIGQKIENIIGFEGDQRIERLESGMQMCQRMRSAGFLSLSFCDETVREVKALLDEHASGWGMKREEGMLVLTWKGNSCVFATAWVPTEMRDHLGIDTCIS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2049 460 ProSiteProfiles GRAS family profile. 41 445 IPR005202 -
Aev10g2049 460 PANTHER OS05G0500600 PROTEIN 8 446 - -
Aev10g2049 460 Pfam GRAS domain family 51 444 IPR005202 -
Aev10g2049 460 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 446 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2049 Aev-Chr10 21472031 21473413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2049 29 446 GRAS Transcription Factor Family AT3G49950 45.433 5.04e-119 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aev10g2049 GRAS 4.1e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2049 - - gmx:100802093 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2049 10 21472031 21473413 Aev10g2049 10 21472031 21473413 ECH