Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2046 ATGAAAGGTCAAGGATATGATGGGTGGTTTATCCGATTGAAATGGATGGTTATGGGCCATGCTAAATCGGATGATATGAAAAAAGTTGATGCGTCTTTAATAGGGTCAATCATTCCATTCATTAATGGCCCTAGTGCTCGGATTTCTATGCTATGGGCCAAGTTTGATGTGGTTGTGATCGGTGTTTGCTTAATTGTAGTTATTAGACTTAGTTGCATGCACCATATGTTGACCAAGGCCCATAGTAAAGGGGATGGATCTAAGACCCTGGCCAAAGTACTGGCAAAATGGAAAGAGTACAATGCCCAGCTTGATTTGCAGAGCGACCCTGATAAGCCAATTCGGAAAGTTCCGGCGAAGGGATCGAAGAAGGGGTGTATGAAAGGTAAGGGAGGGCCTGAGAACTCGCGGTGTAACTACAGAGGTGTTAGGCAAAGGACTTGGGGGAAGTGGGTCGCCGAAATCAGGGAGCCGAACAGAGGGAGAAGGCTCTGGCTAGGCACTTTTACCACTGCCATCGGAGCTGCTCTTGCGTACGATGAAGCTGCAAGGGCAATGTATGGTTCTTGTGCCCGCCTCAACTTTCCCAATGTTTCTGTGGCCAGTTTCTCTGAGGAATCATCAAAGGATTCTCCAGATGCAAACCAATCTGGCTCCTCAGTGGTTGTATCAGCGAATACGGATGAGTCTATGAAATCAGCGAATAACCCCATGGTAGGCACAGAAGAAGAGGATGATGATATGGAGGATCACATTACCTTATCCTTGAGCGTGAAAGTTGAGAATGTGGAAGGCGAATCAGGGGCCAGTTCATCCCCTCCATCCGCCTGA 831 0.4753 MKGQGYDGWFIRLKWMVMGHAKSDDMKKVDASLIGSIIPFINGPSARISMLWAKFDVVVIGVCLIVVIRLSCMHHMLTKAHSKGDGSKTLAKVLAKWKEYNAQLDLQSDPDKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGRRLWLGTFTTAIGAALAYDEAARAMYGSCARLNFPNVSVASFSEESSKDSPDANQSGSSVVVSANTDESMKSANNPMVGTEEEDDDMEDHITLSLSVKVENVEGESGASSSPPSA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2046 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 74 248 - -
Aev10g2046 276 SUPERFAMILY DNA-binding domain 139 196 IPR016177 GO:0003677
Aev10g2046 276 MobiDBLite consensus disorder prediction 205 237 - -
Aev10g2046 276 Pfam AP2 domain 138 188 IPR001471 GO:0003700|GO:0006355
Aev10g2046 276 PRINTS Ethylene responsive element binding protein signature 162 178 IPR001471 GO:0003700|GO:0006355
Aev10g2046 276 PRINTS Ethylene responsive element binding protein signature 140 151 IPR001471 GO:0003700|GO:0006355
Aev10g2046 276 SMART rav1_2 139 202 IPR001471 GO:0003700|GO:0006355
Aev10g2046 276 Gene3D AP2/ERF domain 139 198 IPR036955 GO:0003700|GO:0006355
Aev10g2046 276 MobiDBLite consensus disorder prediction 111 133 - -
Aev10g2046 276 MobiDBLite consensus disorder prediction 205 276 - -
Aev10g2046 276 ProSiteProfiles AP2/ERF domain profile. 139 196 IPR001471 GO:0003700|GO:0006355
Aev10g2046 276 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 74 248 - -
Aev10g2046 276 CDD AP2 138 198 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2046 Aev-Chr10 21453109 21456619 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2046 71 230 AP2-EREBP Transcription Factor Family AT2G40340 53.939 1.69e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g2046 AP2 1.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2046 - K09286 gmx:100499747 293.123