Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2035 ATGGTGAGAACCCCTTGCAGTGACAAGAGTAGTGGACTTAGGAAGGGCACTTGGACTCCGGAGGAAGACAGGAAGTTGGTAGCTTATGTTACTCGCTATGGCTGCTGGAATTGGCGTCTACTCCCCAAGTTTGCAGGTCTTGCAAGGTGTGGGAAGAGTTGCAGACTTAGGTGGATGAACTACCTGAGGCCTGATATCAAAAGAGGGGACTACAGTGAAGAAGAGGAAGAGACTATTATCAGACTTCATCAAAAGCTGGGCAATAGATGGTCTATGATTGCTGCGAATTTGCCAGGAAGAACAGACAACGAGATAAAGAATCACTGGCACACCGCGCTCAAGAAGCGCTCTCATGACAACACCACCAACTCAGACTCATCACCAAACACTAGTGCTATTGGAACTAAAACTAGTAAAGGTAAAGCCTCCAAATCAAAGAAGAATCACTCCCCAATATTAAAAGAAGCCAATAATAATCATAAGGAAATAATGGAGAGAGATCTTTCAGAGATCAGCAGCAACAATAATAATATTACTGGCCCAATAATGATGTCTCCACAACCATCTTCTAGCGTGACAGCAGAAACTGCCACTAATAATGAAGCTGCTGCTGCTGCTACAATAATGATAAACCAGCAGCAGCAGCATGAGGAGAACAACAACAACAACAACAACTTGTTTGTTGTACAAGAATTAGATGATGATGATCTTGCTTATTTTCTGGATGCATACAAAGAGCCGCCCGTGAGTGCAGACTTCTGGACAGAACCATATCTCACAGACGTGTCTTATGTTGCTCCTCCAACTGAATTCTTATTTGATGCTGCACCTGTGCCCTTGATGCATCAACCTCACCATGATGATCATGAATACTACTTTAGTCCCATTTGGGATGTAGACTACTTTTGGGGCCAGAACAACAATACTACTACTACTTTCTACCACCAGGAATGTGGGGGCTTATTCTACTAG 972 0.4352 MVRTPCSDKSSGLRKGTWTPEEDRKLVAYVTRYGCWNWRLLPKFAGLARCGKSCRLRWMNYLRPDIKRGDYSEEEEETIIRLHQKLGNRWSMIAANLPGRTDNEIKNHWHTALKKRSHDNTTNSDSSPNTSAIGTKTSKGKASKSKKNHSPILKEANNNHKEIMERDLSEISSNNNNITGPIMMSPQPSSSVTAETATNNEAAAAATIMINQQQQHEENNNNNNNLFVVQELDDDDLAYFLDAYKEPPVSADFWTEPYLTDVSYVAPPTEFLFDAAPVPLMHQPHHDDHEYYFSPIWDVDYFWGQNNNTTTTFYHQECGGLFY* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2035 323 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev10g2035 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev10g2035 323 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Aev10g2035 323 MobiDBLite consensus disorder prediction 122 139 - -
Aev10g2035 323 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 262 - -
Aev10g2035 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 262 - -
Aev10g2035 323 CDD SANT 71 111 IPR001005 -
Aev10g2035 323 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Aev10g2035 323 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Aev10g2035 323 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Aev10g2035 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Aev10g2035 323 MobiDBLite consensus disorder prediction 113 158 - -
Aev10g2035 323 Gene3D - 70 149 - -
Aev10g2035 323 Gene3D - 15 67 - -
Aev10g2035 323 SMART sant 14 64 IPR001005 -
Aev10g2035 323 SMART sant 67 115 IPR001005 -
Aev10g2035 323 CDD SANT 17 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2035 Aev-Chr10 21395226 21397110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2035 1 143 MYB Transcription Factor Family AT2G31180 60.140 5.30e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g2035 Myb_DNA-binding 8.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2035 K09422 - mnt:21405040 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2035 10 21395226 21397110 Aev10g2035 10 21395226 21397110 ECH
Aev10g2035 10 21395226 21397110 Aev04g2662 04 26370574 26372431 PCT