Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g2034 ATGGTGAGAACCCCTTGGTTTGATAAAAGTGGAAGGAAGAAAGGTAGTTGGACAGCCGAGGAAGATAAGAAGCTAATTGCTTATGTCACTAGATATGGCTGCTGGAATTGGCGCCAACTCCCCAGATTTGCAGGGCTGGCAAGGTGTGGGAAGAGTTGCAGACTGAGATGGCTGAATTATCTGAGGCCAGATGTCAAAAGAGGGGACTACAGCCAAGAAGAAGAGGAGGTTATCGTTAACCTGCATCAGAAGCTGGGCAGCAGATGGTCTGTCATTGCTGCCAATTTACCTGGAAGAACTGATAACGACATCAAGAACCACTGGAACTCCACCCTCAAGAAGCGCTTCTTCTTCCCAACCCCAAAAACACTCCAACAACAACAACAAGATTTCCAGTTTGTGAATAATAATACTAATCAAGAAGAAGAAGATGATGATATCTGGTCAGAGTCATTTCTAGCAGAACTGATGCAAGACAACAACAATAATAATAATAATGAGTACTACTGTTCTGTTGGCTATTATGGACTCGAATCGACACTGCTGCTGCAACCCGCAGTTGAAAATTCTTGGATACACCAATTTGTGGCTGATGACATCTCCCACGTTCCAAACCATCTATTTCCGCATCAATTTTCACAATGA 645 0.4357 MVRTPWFDKSGRKKGSWTAEEDKKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWLNYLRPDVKRGDYSQEEEEVIVNLHQKLGSRWSVIAANLPGRTDNDIKNHWNSTLKKRFFFPTPKTLQQQQQDFQFVNNNTNQEEEDDDIWSESFLAELMQDNNNNNNNEYYCSVGYYGLESTLLLQPAVENSWIHQFVADDISHVPNHLFPHQFSQ* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g2034 214 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Aev10g2034 214 CDD SANT 16 61 IPR001005 -
Aev10g2034 214 CDD SANT 70 112 IPR001005 -
Aev10g2034 214 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Aev10g2034 214 PANTHER MYB-RELATED TRANSCRIPTION FACTOR 1 155 - -
Aev10g2034 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Aev10g2034 214 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Aev10g2034 214 SMART sant 13 63 IPR001005 -
Aev10g2034 214 SMART sant 66 114 IPR001005 -
Aev10g2034 214 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 155 - -
Aev10g2034 214 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Aev10g2034 214 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Aev10g2034 214 Gene3D - 13 66 - -
Aev10g2034 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Aev10g2034 214 Coils Coil 124 144 - -
Aev10g2034 214 Gene3D - 69 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g2034 Aev-Chr10 21389140 21389888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g2034 1 117 MYB Transcription Factor Family AT5G16770 60.684 1.31e-51 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g2034 Myb_DNA-binding 3.9e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g2034 K09422 - tcc:18608584 209.534
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g2034 10 21389140 21389888 Aev10g2034 10 21389140 21389888 ECH
Aev10g2034 10 21389140 21389888 Aev04g2661 04 26358085 26359860 PCT
Aev04g2662 04 26370574 26372431 Aev10g2034 10 21389140 21389888 PCT