Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1985 ATGAGATTAGAGAAGTGCTGGTTTTGTTCTTCTACTGTATACCCTGGACATGGAATCCAGTTTGTTCGTAATGATGCCAAGATTTTTCGGTTCTGTAGGTCTAAATGCCATAAAAACTTCAAAATGAAGAGGAACCCACGTAAAGTAAAATGGACCAAGGCATACCGTCGGGTGCACGGAAAGGATATGACACAGGATTCAATCTTTGAGTTTGAGAGGAAGCGAAACAGGCCTGAGAGATATGACAGGAACCTTGCGGAGAATGTCCTCAAGGCCATTCCTAAGATTGACAAGATCAGAGTCACCAGGGAGGAGAGACACCATAAGAACAGGATGAAAGGCAAAAAGGAGAAGCTTCTCAAGGAGGCGGTGAAGGAGATCGAGCAGGGAATCAGTTTGGTCAAAGCTCCTTCTGTGCTTCGAGAGGATCCATCTCTCACTTTACCAACAAAGATCAAAGTCAGTGTTTCCCAACAGCAATCACAGGAGAAGAATCAACCCATGGAAGAGTGA 513 0.4464 MRLEKCWFCSSTVYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRVHGKDMTQDSIFEFERKRNRPERYDRNLAENVLKAIPKIDKIRVTREERHHKNRMKGKKEKLLKEAVKEIEQGISLVKAPSVLREDPSLTLPTKIKVSVSQQQSQEKNQPMEE* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1985 170 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Aev10g1985 170 MobiDBLite consensus disorder prediction 151 170 - -
Aev10g1985 170 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Aev10g1985 170 SMART 4TRASH 6 44 IPR011017 -
Aev10g1985 170 PANTHER BNAA04G10330D PROTEIN 1 170 - -
Aev10g1985 170 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Aev10g1985 170 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Aev10g1985 170 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
Aev10g1985 170 PANTHER 60S RIBOSOMAL PROTEIN L24 1 170 IPR000988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1985 Aev-Chr10 21104366 21105319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1985 1 170 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 66.471 5.00e-80 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1985 K02896 - gmx:100778077 298.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1985 10 21104366 21105319 Aev10g1985 10 21104366 21105319 ECH