Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1982 ATGAATACTTACTTTGAGATTATTGATGAATCCCAATTGTTGCCATGCCCTTCAACATTCCAACCCTCACCGATTCACACAAAACCTAATAACAATAATAATACTGACACTAATCCATCATCATCGTTACATGATGAATTAGAAATATTGATTAGTGCATCACTACACAAAAAAAGAAAAGGAGGAAGGAAGAAGTTTCAGGAGACAAGGCACCCAATATACAGGGGTGTGAGGTACAGAAAGGGGAAATGGGTTTGCGAAGTTAGGGAGCCAAAGAAAGCAACAAGGATATGGTTAGGGACATACCCTACACCAGAGATGGCAGCTAGGGCACATGATGTTGGCGTCCTTGCCATTAAGGGCACTTCAGCTATCCTAAACTTTCCAAATTCATCTTATGATCTTCCAATTATAGATTCTTCTTCATCTAAGGAGATAAGAGAAGCTGCAAAACAAGTTGCTGAGGTTTTCAGACCAAGCAATTATTATAGTTCCTCCTTGTTCAACTCTAATGATGGGATGAAGAAGAAGAAAAGGTGCAATAATAGCAGTAATGATAAGAAAGGAATAACAACAAAGGTTGATGATGATCCTTTGATTGATGAGAAGAAGATACAGGAAATTGTGTTGGATTCTTCTTCGTTGTTCATGCACAACACTACAAGTTGTGGTGATGATGATGTTGTTAATAGCAACGATGACAGCGGCCTGGGAGAGAAAAACAATGACGATTCGGATCAGAACAATGATCAACTCAACCGGTCTGCGGCAGCGGCGACAATGTTGTTGGATGACGAGGCTACATTGTTTAATATGCGAGATTGTTGGGATTGGGATTGGGATGGAATAATGGAAGAGGGTTTGTGCAATTTCCAGATGTCTTCTATGCAAAGCTCCTCTAACCATTATTATTCGTTGGATTGGGATGTTGCTACTGCTGCTTCTAGCATGGACTTCGATTTATGGACAGACTACTAA 978 0.4008 MNTYFEIIDESQLLPCPSTFQPSPIHTKPNNNNNTDTNPSSSLHDELEILISASLHKKRKGGRKKFQETRHPIYRGVRYRKGKWVCEVREPKKATRIWLGTYPTPEMAARAHDVGVLAIKGTSAILNFPNSSYDLPIIDSSSSKEIREAAKQVAEVFRPSNYYSSSLFNSNDGMKKKKRCNNSSNDKKGITTKVDDDPLIDEKKIQEIVLDSSSLFMHNTTSCGDDDVVNSNDDSGLGEKNNDDSDQNNDQLNRSAAAATMLLDDEATLFNMRDCWDWDWDGIMEEGLCNFQMSSMQSSSNHYYSLDWDVATAASSMDFDLWTDY* 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1982 325 MobiDBLite consensus disorder prediction 226 250 - -
Aev10g1982 325 MobiDBLite consensus disorder prediction 172 194 - -
Aev10g1982 325 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 6 323 IPR045277 GO:0003700
Aev10g1982 325 SMART rav1_2 73 135 IPR001471 GO:0003700|GO:0006355
Aev10g1982 325 CDD AP2 72 131 IPR001471 GO:0003700|GO:0006355
Aev10g1982 325 ProSiteProfiles AP2/ERF domain profile. 73 129 IPR001471 GO:0003700|GO:0006355
Aev10g1982 325 SUPERFAMILY DNA-binding domain 73 130 IPR016177 GO:0003677
Aev10g1982 325 Gene3D AP2/ERF domain 73 130 IPR036955 GO:0003700|GO:0006355
Aev10g1982 325 MobiDBLite consensus disorder prediction 18 42 - -
Aev10g1982 325 Pfam AP2 domain 72 114 IPR001471 GO:0003700|GO:0006355
Aev10g1982 325 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 6 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1982 Aev-Chr10 21089389 21090366 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1982 50 159 AP2-EREBP Transcription Factor Family AT1G12610 57.658 7.37e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1982 AP2 1e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1982 - K09286 var:108332912 202.216