Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1979 ATGAATAATGTATCTCCTTATTGTTGCAAATATTCTTATTCCTCCTCCTCCTCTTCTTCTTCTTCATCACCGTCGTCTTCGTCTTCTAAAAGCCAACAACTAGTATCCTCAGCAGCACCACCGAAGAAGAAAGCAGCAGGGAGGAAGAAGTTCCGGGAGACGCGGCACCCGGTGTACAGGGGTGTCCGGCAGAGGAACGAGGACAGGTGGGTGTGTGAAGTTAGGGAACCAAATAAGAAAACAAGGATATGGCTTGGGACATACCCTACCCCTGAAATGGCTGCTAGGGCACACGATGCCGCTGTCCTTGCACTTAGGGGCTCCTCTGCCATCTTCAACTTCCCTCACTCTGTTTCTCTTCTCCCAATTGCAAGCTCATCCTCACCCGCCGATATTCGAGCCGCCGCAGCAAAAGCTGCAGAGACTGATTACTCATCATCATCATTGTTCACCACTAGTACCATTTCCAGTGTTAGGAATAGTAACGGTGATGGTGATAATGATGATGAATACTCGAGATCCATGTTCTTTGATGAGGAGGCATTGTATAATATGCCAGTTTTGTTGGATAGTATGGCGGAGGGTCTGCTTATGACCCCACCGTCCATCAAGCATGCTTTTGATTGGGACAATAATCTGCAATATGACGACCATCAATCCCTAACTTACCTCAATCTATGGACTCACTAG 690 0.4739 MNNVSPYCCKYSYSSSSSSSSSSPSSSSSKSQQLVSSAAPPKKKAAGRKKFRETRHPVYRGVRQRNEDRWVCEVREPNKKTRIWLGTYPTPEMAARAHDAAVLALRGSSAIFNFPHSVSLLPIASSSSPADIRAAAAKAAETDYSSSSLFTTSTISSVRNSNGDGDNDDEYSRSMFFDEEALYNMPVLLDSMAEGLLMTPPSIKHAFDWDNNLQYDDHQSLTYLNLWTH* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1979 229 Gene3D AP2/ERF domain 58 117 IPR036955 GO:0003700|GO:0006355
Aev10g1979 229 PRINTS Ethylene responsive element binding protein signature 59 70 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 PRINTS Ethylene responsive element binding protein signature 81 97 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 2 229 IPR045277 GO:0003700
Aev10g1979 229 MobiDBLite consensus disorder prediction 1 58 - -
Aev10g1979 229 MobiDBLite consensus disorder prediction 1 38 - -
Aev10g1979 229 Pfam AP2 domain 57 107 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 SMART rav1_2 58 121 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 SUPERFAMILY DNA-binding domain 58 117 IPR016177 GO:0003677
Aev10g1979 229 CDD AP2 59 117 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 ProSiteProfiles AP2/ERF domain profile. 58 115 IPR001471 GO:0003700|GO:0006355
Aev10g1979 229 PANTHER CBF/DREB1 TRANSCRIPTION FACTOR 2 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1979 Aev-Chr10 21072230 21072919 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1979 4 228 AP2-EREBP Transcription Factor Family AT5G51990 43.290 1.28e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1979 AP2 2.1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1979 - - gmx:100816109 207.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1979 10 21072230 21072919 Aev10g1979 10 21072230 21072919 ECH