Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1963 ATGGCAATTGCTAAGAAATCAACCCCGACATTGGAATGCATGGAAGTGCCACCATGGCTGGAAGTGCTATTATCAACGATATTCTTCACAGCATGTGAAGTCCACACCCAAGAGTCAAGAAACGAATGCAAAATGCTCTGTCTCGATTGCACCGATTATGAACCATCCTGTGTCCACTGCATTAATTCATCTCATCAGGGTCATCGCGTGATTCAGATAAGGAGGTCTTCGTATCACGATGTGGTGAGGGTGACAGAGATTCAGAAAGCTGTGGACCTGACAGCGATTCAGACATATGTCATCAACGGTTCAAGGGTCATTTTCCTCAACACTAGGGCTCCAACTAACCACAAGCCCAAAACCGGTGGCAAAAATTGCTCTAAGATTATCCACACCAACTGCCTCACTTGCACTAGGAATCTCATTGACCCTTATCATTTCTGTTCTTTGGAATGCAAGCTGGAGTGGACAAAGAAAATGGAGAGTGAAAGCTTTGTTGATGGAGGAGGAATTGGAACAAAGAAGAAGGAAAAGAGTATAAGAGAAGTGAATTCTTCTAATTATACTCAGGGATCTCGACCCATTAACTCAAATTCAAGGAAGAGAAAGGGAATACCTCGTAGGGCTCCTTTGAGTTGA 639 0.4366 MAIAKKSTPTLECMEVPPWLEVLLSTIFFTACEVHTQESRNECKMLCLDCTDYEPSCVHCINSSHQGHRVIQIRRSSYHDVVRVTEIQKAVDLTAIQTYVINGSRVIFLNTRAPTNHKPKTGGKNCSKIIHTNCLTCTRNLIDPYHFCSLECKLEWTKKMESESFVDGGGIGTKKKEKSIREVNSSNYTQGSRPINSNSRKRKGIPRRAPLS* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1963 212 Pfam PLATZ transcription factor 74 154 IPR006734 -
Aev10g1963 212 MobiDBLite consensus disorder prediction 183 199 - -
Aev10g1963 212 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Aev10g1963 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 211 - -
Aev10g1963 212 MobiDBLite consensus disorder prediction 167 212 - -
Aev10g1963 212 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 14 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1963 Aev-Chr10 20953249 20954483 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Aev10g1963 PLATZ 1.9e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1963 - - aip:107610412 206.453