Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1959 ATGGCGAAGGGTGCGGATTCGGACGAGGTCATGATGCTTTCCAGGATTCGTACGGGTCTCAAGAGGGAGTTCGCATTCGCCATGAAGGCGCAATCCGAGATCTGCAGCGACTCCTTGGGCCGGACACGAGCCGGAAACACCCGCAATGGGCCTCCCGTTCGCCCCGCACGGCCCGGCAAGCGTTCCAGAAAGTCTGGTTTGTTCAAGGAGGATGAGCCGGAGGGGAAGAACGACGACCAGGAAGATCAAGAGGTTGAAGAAGCCGCACCTGAGGTGGAGGAAACGGCGGCGAAGGATTCCGAGGAGGCTGGCGACGTCGTCAGCGAGGAGGAGGCGAAGAGCGACGTGGTGGATCTCATGAGCGACGACGAGCGTAAGAACCAAGAGGGTAAGGCTGCGAAGCCCGTTAGCGAGGAGGAACCGAAGGGTGATGCTGTGGTTGAAACTGTGATCAACGAGGAACCTGTCATTGAAGAGGAGGAGCAGCGTGTGGTTGTTGATGAGACCGAGAATAGGGATGCTCCTGAGGAGGAGAAAGCTGCACCTGAGGATGAGAAAGCTGTACCTGAGGATGAGAAAGCTTCTGTTCCGGAAACCCCGGTTTTGACATGTGGTGGTGATGGCAGGGGAAGGAAGAAGAAGAAGAAGGTTTTTTCGGAGAGGCTTCCAAGGAGGTTCACTAGGTCGGCATTGAAGGAACAAGCTGAAGAAGAGACAAAGGTTTTGAATGATGGGGAGAATGCTAGTGTTGCAGTAGCTGTTGGAGCTGATGGTGATGATGTTCATAAGGAAGCAGAGGTTAAAGCTGCTGAGGTTGAGGCCGAGGCTACACCATTGATTACAGTAACCCCAACTCCAGCAAGAGTTTCGAGGAAATCCATGAAGAGGTTCCCTACCAAGCTCAAGGACCTTCTGTCCACTGGGATTCTAGAGGGTCTGTCAGTGAAGTATGTTAGGGGAGTAAAGGCACGAAGGCAAGAAGAAGTGGGGCTTGAAGGAGTGATCAAGGGCTCCGGGGTTTTGTGCTATTGTGAGAGTTGCGAGGGGAATGAGGTTGTCACACCCACTGTGTATGAGTTGCATGCTGGTAGTTCAAACAAACGCCCCCCTGAGTATACTTACCTTGACAATGGGAGTACTCTTCGTGATATCATGAATGCATGCTGGAGTGTTCCTTTGGACATGTTGGACGAAGCTGTCCAAAAGATCCTTGGTGGCTTCACTTTGAAGAAATCTAACATCTGTTTTAACTGCAGAGCTGACAATGGTTTGTCAAGATTATTAGTATGTGATTCATGCTTGGAATTGAAGGATTCTCAGCCTAGTCCCCCTCAAACTACCATTCCTATGACGAACACTAAAAGTGTTTCACTTGCAGTTCTACCCAGATCGCCAGAACCTGTTGTGGTTCCAAAGTCATTAAACAATGGGATGAAGCATAGCTCATCAGTGGAACCTGTTGCGGTTCCAAAGTCGTTAAACAATGGGATGAAACATAGCACATCAGTGGAACCTGTTGCGGTTCCAAAGTCATTAAACAATGGGATGAAGCATAGCACATCTCGTGGTAAGAGTCAAGGAAGACTAACCAGAAAGGATCTTCGCTTGCATAAGTTGGTCTTTGAGGAAGATGTGTTGGCAGATGGAACTGAAGTACATTACTATGCTCATGGAAAGAAAATTTTGAAAGGTTACAAAAAGGGTTACGGAATTTTTTGTACCTGCTGCAACTCTGAGGTCAGTGCTTCTCAGTTTGAAGCTCATGCTGGCTGGGCATCTCGACGCAAGCCTTACCTCCACATATACACATCTGATGGAGTCTCACTCCATGATTTGTCCATCTCTTTGTCAAAAGATAGGAGGTTTGCTACCACTGATAATGATGATCTCTGCAGCATTTGTGAAGATGGGGGGGATCTTTTGTGTTGTGATGGATGTCCGAGAGCTTTTCACATAGACTGTGTTCCTCTACCTTGCATTCCCAGCGGTACGTGGTATTGTAAGTATTGCCAGAATCTTTATGCAGAACATAGTGTGAATGCTCAGGGTCAGAAAAGCCGAAGATGCAGTCGAGTTGTCAAAACTATTGAGGGTGGCCATGGTGGATGTGCCTTATGCAGCTGTCATTATTTCAGTAAAAGCTTTGGTCCTCGGACAGTGATTATTTGTGACCAGTGTGAGAAGGAATATCATGTTGGGTGTTTGAAGGAGCATAATATTGAGGACCTTCAGGAATTACCTGAAGGGAATTGGTTCTGCAGTTCTGATTGCATCAAAACTCATTCTGCTCTTGTGAATATCGTGGCTAGCAAGGAGAATAGTCTCCCAGATTCCCTTTTAAGTTTGGTTAAAAAGAAGCATGAAGAGAAAGGTTTAGAGATGGGGGTTGGTCTCGATATTAAATGGAGTCTTCTGAATTGGAAGTTGGATTCTTCTGTTGAATGTAGGAAGTTTCTTTCAAAGGCTGTTTCTATCTTCCATGAGAGGTTTGATCCTATAGTTGATTCTTCTTCTGGTCGTGATTTCATTCCAGTATTGCTGTTTGGAAGGAACATCCGGGGTCAAGATTATGGTGGAATGTACTGTGCAGTGCTCACTGTCAATCAAGTGGTCGTGTCTGCTGGAATATTTCGTGTCTTTGGGCTAGAAGTGGCAGAGCTTCCTTTAGTGGCAACAGTTTCTGATTCCCAAGGACAGGGTTACTTCCAGTGCCTGTTTTCTTGCATTGAGAGGGTACTCGCATCTCTGAACGTGAAAAACCTTGTCTTGCCGGCTGCTGATGAAGCAGAATCAATATGGACAAATAAATTTGGGTTTACAAAGCTAGGCCAAGACGAGATAAACCATTACAAGAAATATTATCGCATGATGGTATTTCAAGGGACTTCATTACTGCAGAAGCCGGTTCCTGCACTCTGA 2919 0.4697 MAKGADSDEVMMLSRIRTGLKREFAFAMKAQSEICSDSLGRTRAGNTRNGPPVRPARPGKRSRKSGLFKEDEPEGKNDDQEDQEVEEAAPEVEETAAKDSEEAGDVVSEEEAKSDVVDLMSDDERKNQEGKAAKPVSEEEPKGDAVVETVINEEPVIEEEEQRVVVDETENRDAPEEEKAAPEDEKAVPEDEKASVPETPVLTCGGDGRGRKKKKKVFSERLPRRFTRSALKEQAEEETKVLNDGENASVAVAVGADGDDVHKEAEVKAAEVEAEATPLITVTPTPARVSRKSMKRFPTKLKDLLSTGILEGLSVKYVRGVKARRQEEVGLEGVIKGSGVLCYCESCEGNEVVTPTVYELHAGSSNKRPPEYTYLDNGSTLRDIMNACWSVPLDMLDEAVQKILGGFTLKKSNICFNCRADNGLSRLLVCDSCLELKDSQPSPPQTTIPMTNTKSVSLAVLPRSPEPVVVPKSLNNGMKHSSSVEPVAVPKSLNNGMKHSTSVEPVAVPKSLNNGMKHSTSRGKSQGRLTRKDLRLHKLVFEEDVLADGTEVHYYAHGKKILKGYKKGYGIFCTCCNSEVSASQFEAHAGWASRRKPYLHIYTSDGVSLHDLSISLSKDRRFATTDNDDLCSICEDGGDLLCCDGCPRAFHIDCVPLPCIPSGTWYCKYCQNLYAEHSVNAQGQKSRRCSRVVKTIEGGHGGCALCSCHYFSKSFGPRTVIICDQCEKEYHVGCLKEHNIEDLQELPEGNWFCSSDCIKTHSALVNIVASKENSLPDSLLSLVKKKHEEKGLEMGVGLDIKWSLLNWKLDSSVECRKFLSKAVSIFHERFDPIVDSSSGRDFIPVLLFGRNIRGQDYGGMYCAVLTVNQVVVSAGIFRVFGLEVAELPLVATVSDSQGQGYFQCLFSCIERVLASLNVKNLVLPAADEAESIWTNKFGFTKLGQDEINHYKKYYRMMVFQGTSLLQKPVPAL* 973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1959 972 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 623 693 IPR013083 -
Aev10g1959 972 ProSiteProfiles Zinc finger PHD-type profile. 628 673 IPR019787 -
Aev10g1959 972 MobiDBLite consensus disorder prediction 509 529 - -
Aev10g1959 972 CDD PHD1_AIRE 630 670 - -
Aev10g1959 972 ProSitePatterns Zinc finger PHD-type signature. 631 670 IPR019786 -
Aev10g1959 972 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 856 954 IPR016181 -
Aev10g1959 972 Pfam Tify domain binding domain 564 612 IPR032308 -
Aev10g1959 972 Pfam Tify domain binding domain 333 388 IPR032308 -
Aev10g1959 972 SUPERFAMILY FYVE/PHD zinc finger 703 755 IPR011011 -
Aev10g1959 972 PANTHER AUTOIMMUNE REGULATOR 1 968 - -
Aev10g1959 972 PANTHER AUTOIMMUNE REGULATOR 1 968 - -
Aev10g1959 972 MobiDBLite consensus disorder prediction 33 216 - -
Aev10g1959 972 Gene3D - 806 967 - -
Aev10g1959 972 MobiDBLite consensus disorder prediction 91 147 - -
Aev10g1959 972 MobiDBLite consensus disorder prediction 165 193 - -
Aev10g1959 972 MobiDBLite consensus disorder prediction 75 90 - -
Aev10g1959 972 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 701 761 IPR013083 -
Aev10g1959 972 SUPERFAMILY FYVE/PHD zinc finger 621 672 IPR011011 -
Aev10g1959 972 Pfam PHD-finger 631 672 IPR019787 -
Aev10g1959 972 SMART PHD_3 707 757 IPR001965 -
Aev10g1959 972 SMART PHD_3 630 671 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1959 Aev-Chr10 20925410 20931564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1959 298 969 PHD Transcription Factor Family AT2G36720 44.506 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev10g1959 TDBD 3.6e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1959 - - gmx:100803825 1115.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1959 10 20925410 20931564 Aev10g1959 10 20925410 20931564 ECH