Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1958 ATGGGTGGTCAGATCCAGTATTCCGATAAGTACTTCGATGATACTTACGAGTACAGACATGTGGTTCTGCCTCCTGAAGTCGCTAAACTGCTCCCTAAGAATCGCCTCCTCTCTGAGAACGAGTGGCGTGCAATAGGGGTTCAGCAGAGCCGTGGGTGGGTTCATTATGCAATTCATCGCCCTGAGCCACACATCATGCTCTTCAGGAGGCCTTTGAACTTCCAGCAGCAATCCATGCTTGCCAACTGA 249 0.506 MGGQIQYSDKYFDDTYEYRHVVLPPEVAKLLPKNRLLSENEWRAIGVQQSRGWVHYAIHRPEPHIMLFRRPLNFQQQSMLAN* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1958 82 SUPERFAMILY Cell cycle regulatory proteins 3 77 IPR036858 GO:0016538
Aev10g1958 82 SMART CKS_2 4 73 IPR000789 GO:0016538
Aev10g1958 82 Gene3D - 1 82 IPR036858 GO:0016538
Aev10g1958 82 Pfam Cyclin-dependent kinase regulatory subunit 5 71 IPR000789 GO:0016538
Aev10g1958 82 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT 1 78 - -
Aev10g1958 82 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 7 25 IPR000789 GO:0016538
Aev10g1958 82 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 1 78 - -
Aev10g1958 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 4 18 IPR000789 GO:0016538
Aev10g1958 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 56 70 IPR000789 GO:0016538
Aev10g1958 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 19 33 IPR000789 GO:0016538
Aev10g1958 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 41 55 IPR000789 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1958 Aev-Chr10 20923378 20924101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1958 3 77 Core Cell Cycle Gene Families AT2G27970 93.333 3.46e-51 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1958 K02219 - osa:4331610 161.77