Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1956 ATGATTTCAAGGGGATTCCAAAACCTTGCTCATCATCAAGGGATGCATATGTTTCCTGTGACAACAGAAGATTTGGTGTCTGCTAATTCAGTGGAAGTTGCTGTCAACTCTGCCTCTGGCTCTTCATCTGGTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCACACTCTAGCACCCTCCTCTTCAATCTCTCTGTTCTGAAGGACAAGCTTAGCCAGGTTCAGACCCTTGTTGGTGTTATTCTCTCCCCAGATCAGAGCCTCCCTGAGTCAACATCCATGGCTGTTTCAAGCATGAACTCCACAATCCAAGAAATCATAGTCACTGCCTCTTCAATGATGTTCACATGCCAACAGATGGCTCCTTCCTTCCCTTCTCCACCAGGTACCAATGAATTGCACCACCAATCTGAACAGCATCAAAGGATGAATCATCACTCATCATCACATAATTATGGCACCAACAATAACAGAGTTGTCCTTACCACCATAGGCACAGAACACAACGATATTAGAGGTCAGGGTTTCTTCACTAGCACTGAGTCTGAGGCACTGGATTGGTTTGGTGAAACCTATAACAACAACAACAACAATAATAGTAATAGTATTAATTGCAAGCTTAAGGGTGAGGATGATATTGATAAAAGTGTTGCAATTAGTGATAGCAAGATGTCACCGGCAGGGGATGATGATATTGATGAGAATAATAATGTTAATGAAGGGTATGGAGGGAACTATGACATAATTGAATTGGATGCTTCTGATTTATTGGCTAAGTACACACATTATTGCCAAGTTTGTGGTAAAGGGTTCAAGCGAGATGCCAATTTGAGGATGCACATGAGGGCACATGGAGATGAGTACAAAACAAGTGCTGCATTGAGCAACCCTCTGAAGAATATTGGTGGAAGAGATGAGTGTTTGATGAGTGAGATTATGATGAAGCCGAAGAAGTATTCGTGCCCTCAACAAGGGTGTAGGTGGAACAAGAAGCATGCCAAGTTCCAGCCATTGAAGTCAATGATCTGTGCAAAGAACCATTACAAGAGGAGCCATTGTCCGAAGATGTATGTGTGCAAGAGGTGTAATCAGAAGCAATTCTCTGTGCTTTCTGATTTGAGGACTCATGAGAAGCATTGTGGGGATCTCAAGTGGCAGTGTTCTTGTGGAACCACCTTTTCTAGGAAGGATAAGCTTATGGGCCATGTTGCTTTGTTCGTGGGCCACACGCCTTGTCCTAATTCTACTTCTTCAACTAATGGAATCATAATGTTGCCACCATTCTCTGCTGGGAAATTGCAGCTGCAGAATGTGGATGGAACTTGA 1326 0.4291 MISRGFQNLAHHQGMHMFPVTTEDLVSANSVEVAVNSASGSSSGSSSSSSSSSSSHSSTLLFNLSVLKDKLSQVQTLVGVILSPDQSLPESTSMAVSSMNSTIQEIIVTASSMMFTCQQMAPSFPSPPGTNELHHQSEQHQRMNHHSSSHNYGTNNNRVVLTTIGTEHNDIRGQGFFTSTESEALDWFGETYNNNNNNNSNSINCKLKGEDDIDKSVAISDSKMSPAGDDDIDENNNVNEGYGGNYDIIELDASDLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALSNPLKNIGGRDECLMSEIMMKPKKYSCPQQGCRWNKKHAKFQPLKSMICAKNHYKRSHCPKMYVCKRCNQKQFSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVALFVGHTPCPNSTSSTNGIIMLPPFSAGKLQLQNVDGT* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1956 441 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 28 419 IPR044300 GO:0010044|GO:0010447
Aev10g1956 441 MobiDBLite consensus disorder prediction 37 56 - -
Aev10g1956 441 SUPERFAMILY beta-beta-alpha zinc fingers 260 287 IPR036236 -
Aev10g1956 441 ProSitePatterns Zinc finger C2H2 type domain signature. 264 284 IPR013087 -
Aev10g1956 441 Gene3D Classic Zinc Finger 355 405 - -
Aev10g1956 441 ProSiteProfiles Zinc finger C2H2 type domain profile. 262 289 IPR013087 -
Aev10g1956 441 Gene3D Classic Zinc Finger 252 322 - -
Aev10g1956 441 SMART c2h2final6 319 352 IPR013087 -
Aev10g1956 441 SMART c2h2final6 357 379 IPR013087 -
Aev10g1956 441 SMART c2h2final6 262 284 IPR013087 -
Aev10g1956 441 MobiDBLite consensus disorder prediction 124 153 - -
Aev10g1956 441 PANTHER OS08G0562300 PROTEIN 28 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1956 Aev-Chr10 20917620 20918945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1956 15 416 C2H2 Transcription Factor Family AT5G22890 42.584 3.19e-99 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g1956 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1956 - - gmx:100802769 478.018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1956 10 20917620 20918945 Aev10g1956 10 20917620 20918945 ECH
Aev10g1956 10 20917620 20918945 Aev04g2931 04 29077169 29078221 PCT