Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1943 ATGGGAAGAGCACCATGCTGTGACAAGGCAAATGTGAAGAGAGGGCCATGGTCTCCTGAAGAAGACTCTAAGCTGAAAGAGTACATAGAGAAGCATGGCACTGGTGGAAACTGGATCGCTCTTCCTCAGAAAGCTGGTCTAAAGAGATGTGGGAAGAGTTGCAGGTTGAGATGGCTTAACTATCTGAGGCCTAACATTAAGCATGGAGAGTTCTCTGATGAGGAGGACAGAATCATTTGTAGCCTTTATGCAAATATTGGAAGCAGGTGGTCAATTATAGCAGCTCAGTTGCCAGGCAGGACTGACAACGATATCAAGAACTACTGGAACACCAAGCTGAAGAAGAAGCTCATGGCTTTGCTTCCTCCATCAACAACAACACCAGTTACTCCTCAGAGAAAATCTCCATTATCTTCCTCCCCTCAAAACCTACCAACACTAATTCCTTCACTGCCCCCTTATAATTACACAGATCATCATCACCCCTACTACTCCTCTTATTATTACAGTCCACCACCACCTGCAACCATATCTTTCTCTGGCCTTGAACCCATTTCTGTTCATTCTACAACCTCTCTCCCAAGTTTGTACCAAAACCAGGAGCACTTGATGAGCTCTGCTGCTATTAGTCCCATGCAGTTGCAGTACTACCACAACAACAATAATAGCATGAGGGACAGTAATAGTAATAGTAATAATAATAATGTGTTCATGTTTGGGAGTAGTGATCAAGGAAGTTGCAGTTCATCTGATGGGAGCTGTAGCAATAGTCTTATGGGATGCCAAGGAAGCAGCAGTGATAATAATGGTGAGTATGGTATTACCCAATGGACAGAAAAGCCAAATGGGTGCATTAATTATCAAACAGCAACAGCAACAGCAATGGACTATGAACTAGAGGTTATTAAGCAACTTATTAGCAGTAGCACTTGTACTAACAACAATAATATTATCATTGATGGGTACTCATCAGCAGCAGCAGCAGCAGCAGTGAGTAGTAGTGTTGATGAAAACAAGATGGGGTTGGGGATGTACAACTACTACTACTGA 1050 0.4286 MGRAPCCDKANVKRGPWSPEEDSKLKEYIEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGEFSDEEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMALLPPSTTTPVTPQRKSPLSSSPQNLPTLIPSLPPYNYTDHHHPYYSSYYYSPPPPATISFSGLEPISVHSTTSLPSLYQNQEHLMSSAAISPMQLQYYHNNNNSMRDSNSNSNNNNVFMFGSSDQGSCSSSDGSCSNSLMGCQGSSSDNNGEYGITQWTEKPNGCINYQTATATAMDYELEVIKQLISSSTCTNNNNIIIDGYSSAAAAAAVSSSVDENKMGLGMYNYYY* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1943 349 MobiDBLite consensus disorder prediction 122 144 - -
Aev10g1943 349 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Aev10g1943 349 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Aev10g1943 349 CDD SANT 16 62 IPR001005 -
Aev10g1943 349 SMART sant 13 64 IPR001005 -
Aev10g1943 349 SMART sant 67 115 IPR001005 -
Aev10g1943 349 MobiDBLite consensus disorder prediction 123 144 - -
Aev10g1943 349 Gene3D - 7 68 - -
Aev10g1943 349 PANTHER TRANSCRIPTION FACTOR RAX3 1 315 - -
Aev10g1943 349 PANTHER OS09G0431300 PROTEIN 1 315 - -
Aev10g1943 349 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Aev10g1943 349 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Aev10g1943 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Aev10g1943 349 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Aev10g1943 349 CDD SANT 70 111 IPR001005 -
Aev10g1943 349 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Aev10g1943 349 Gene3D - 70 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1943 Aev-Chr10 20823451 20825135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1943 1 223 MYB Transcription Factor Family AT5G57620 56.522 9.66e-79 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g1943 Myb_DNA-binding 8.4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1943 K09422 - gmx:100808114 315.849
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1943 10 20823451 20825135 Aev10g1943 10 20823451 20825135 ECH
Aev10g1943 10 20823451 20825135 Aev04g2951 04 29307191 29309053 PCT