Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1923 ATGGGATTTGGTAATTCAAGATCTGTAAGATTTGTAGATGATCCTGAACTGTCAAAAATCCCAGCAACTTATGGTGACAGTGTAGTCAAGCTTAAATACCACATTAATGGGACACAAATACCTGAGCCTAGTTCCAAAATGGCACAGAAGAAGGTGACAGCAGAGAAGACAGGGAAGTTCTTGAAAACTAGAGTTTTGTCTAGAGTTTTCTCAGAGGACTATGACAGGGTAAAGAGAAGAATATTAGATCCTAGGGGACAAACCATCCACCGATGGAACAAGATTTTCTTGTTAGCATGTTTGGTTTCTTTGTTTGTGGACCCTTTGTTCTTTTATTTGCCACTAGTCAGAGATGAAGTGTGCATTGATATTGGAAAAACGCTGGAAGTTATTCTCACAATCATAAGATCAGTTGGGGATGTCTTCTACATGATTCAGATTGTGATCAAGTTTCGTACAGCTTATGTTGCTCCTTCTTCGCGGGTATTTGGAAGAGGAGAACTTGTTATAGGCACTTCTAAGATTGCAGCTAGGTACCTTTTCAAGGGTTTCTGGTTAGACTTTGTTGCTGCATTGCCCCTTCCTCAGGTGCTAATTTGGATAGTTATCCCAACTCTTAGGGGTTCAACCATGGCAAACACCAAAAATGTGCTACGGTTTTTCATTATCTTCCAGTACTTCCCAAGGCTATTCTTGATTCTTCCACTTTCATCACAACTTGTTAAGGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGAGCTGTTTACAACCTCTTACTCTACATGCTGGCGAGCCATATTATAGGAGCTTTCTGGTATCTTCTATCGATCGAGCGTCAAGAAGCATGTTGGAGAAGTGTATGTAATATAGAGAAGCCTTCTTGTCAATATGGATTCTTTGACTGCCACAGGGTTGGAGGTCCCCTCAGGAGCTCCTGGTTCATAGCTAGTAATGTCACAAATTTATGTTCACCGAATACTAAGTTTTACCAGTTTGGTATATATGCTGATGCTGTGACTTCAAAGGTTACATCCTCGCCATTCTTCAATAAGTACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATCTCAGTTCCTTGGGACAAGGCCTTCTTACTAGTACATTTGTTGGAGAAATAATGGTGGCCATTGTTGTTGCAACCGTTGGATTAGTTCTTTTTTCATTGCTCATTGGTAATATGCAGACATACCTACAATCGACAACTGTGCGGTTAGAAGAGTGGAGGGTGAAAAGAACTGATACGGAACAATGGATGCATCACAGGCAACTACCTGCAGAGCTAAGACAATCAGTGCGCAAATATCATCAATACAAATGGCTGGCTACGCGAGGAGTTGATGAAGAAGCTCTCCTCAAAGGTCTTCCGGTGGATCTTAGGAGAGACATCAAACGCCACCTTTGCCTTGAACTAGTCCGAGGAGTTCCATTGTTTGACCAAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGGCTAAAGCCTGCACTGTGCACTGAGGGAACCTACCTTGTGAGAGAAGGTGATCCAGTGAATGAGATGCTCTTCATAATCAGAGGCCATCTTGATTCCTACACCACAAATGGAGGCAGGGCTGGATTCTTCAACTCATGTCGTATTGGGCCAGGTGATTTCTGTGGTGAGGAGCTACTAACTTGGGCCTTGGACCCATGGCCCAGTGTGATTCTCCCTTCTTCCACCAGAACTGTCAGGGCCTACTCAGAAGTTGAGGCATTTGCACTCATAGCGGAAGACCTCAAGTTTGTTGCATCACAATTTAGAAGGCTACATAGTAAACAACTTAGGCACAGGTTCAAGTTTTACTCACACCAATGGAGAACTTGGGCTGCTTGTTTCATTCAAGCTGCGTGGAGAAAGCACAAGAAAAGGAAGGAAATTGCTGAACTAACTGCTAAGGAGAATGAGAATCTCTCTGTTTCTGAGCCAGAGACAGAGTCTGAGGAGGAAAGCAATTTGCAGAAGCCAGCAGAGTCAATTTTTTCTTTTGATGAATGA 2037 0.4305 MGFGNSRSVRFVDDPELSKIPATYGDSVVKLKYHINGTQIPEPSSKMAQKKVTAEKTGKFLKTRVLSRVFSEDYDRVKRRILDPRGQTIHRWNKIFLLACLVSLFVDPLFFYLPLVRDEVCIDIGKTLEVILTIIRSVGDVFYMIQIVIKFRTAYVAPSSRVFGRGELVIGTSKIAARYLFKGFWLDFVAALPLPQVLIWIVIPTLRGSTMANTKNVLRFFIIFQYFPRLFLILPLSSQLVKATGVVTETAWAGAVYNLLLYMLASHIIGAFWYLLSIERQEACWRSVCNIEKPSCQYGFFDCHRVGGPLRSSWFIASNVTNLCSPNTKFYQFGIYADAVTSKVTSSPFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMVAIVVATVGLVLFSLLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPAELRQSVRKYHQYKWLATRGVDEEALLKGLPVDLRRDIKRHLCLELVRGVPLFDQMDERMLDAICERLKPALCTEGTYLVREGDPVNEMLFIIRGHLDSYTTNGGRAGFFNSCRIGPGDFCGEELLTWALDPWPSVILPSSTRTVRAYSEVEAFALIAEDLKFVASQFRRLHSKQLRHRFKFYSHQWRTWAACFIQAAWRKHKKRKEIAELTAKENENLSVSEPETESEEESNLQKPAESIFSFDE* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1923 678 Gene3D Helix hairpin bin 411 475 - -
Aev10g1923 678 CDD CAP_ED 484 615 IPR000595 -
Aev10g1923 678 SMART cnmp_10 484 615 IPR000595 -
Aev10g1923 678 ProSiteProfiles IQ motif profile. 620 649 IPR000048 GO:0005515
Aev10g1923 678 ProSiteProfiles cAMP/cGMP binding motif profile. 484 588 IPR000595 -
Aev10g1923 678 Pfam Ion transport protein 92 411 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Aev10g1923 678 Gene3D - 95 408 - -
Aev10g1923 678 MobiDBLite consensus disorder prediction 646 678 - -
Aev10g1923 678 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 4 651 - -
Aev10g1923 678 SUPERFAMILY Voltage-gated potassium channels 83 406 - -
Aev10g1923 678 Gene3D Jelly Rolls 482 602 IPR014710 -
Aev10g1923 678 PANTHER - 4 651 - -
Aev10g1923 678 SUPERFAMILY cAMP-binding domain-like 414 607 IPR018490 -
Aev10g1923 678 PRINTS EAG/ELK/ERG potassium channel family signature 353 370 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev10g1923 678 PRINTS EAG/ELK/ERG potassium channel family signature 264 274 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev10g1923 678 PRINTS EAG/ELK/ERG potassium channel family signature 147 156 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev10g1923 678 PRINTS EAG/ELK/ERG potassium channel family signature 397 406 IPR003938 GO:0005249|GO:0006813|GO:0016020
Aev10g1923 678 PRINTS EAG/ELK/ERG potassium channel family signature 447 454 IPR003938 GO:0005249|GO:0006813|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1923 Aev-Chr10 20678794 20681545 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1923 58 648 Ion Channels AT2G28260 79.019 0.0 999
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1923 K05391 - gmx:100811847 1158.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1923 10 20678794 20681545 Aev10g1923 10 20678794 20681545 ECH
Aev10g1923 10 20678794 20681545 Aev04g2994 04 29699123 29703910 PCT