Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1917 ATGTCTGAGGATGTTGGTAATAATATGAAGGACTCTTGGTTCTTCGACAAGAATTTTAATGGCCTGTCTGATGAGGCTTTCGATGATGTGGTCAATTTTTTCGATTTCCCATTGGAAGATGTGGAACCTAATGCTGTGGATGAAGACTGGGATGCTCAATTTAAACGCCTTGAAGAACCATGTTTTGATGTCTTTTCAGTGTCATCAGCTGGGCTCTGTGCCAAAGCACAAAATGAAAAGCCACAACTTGGGAGGAATTTCTCCGCTTCTTGCAATGAGGTTCCCCCAATGAAACAACTGGCACAGACTGGTGGACTGACATATGGAAAAACCATTCCCATCCAGAATTTATCTTGCAATGGAAAAGACCTGCATCAATTCCGAACCCACAGTCCAGTTTCTGTATTTGAAAGCAGCAGTTCTTCCTCAGCAGAGAACACCAACTTTGATCTACCTGCCATCCCAGTAAAGCGTGCTCGGAGTAGGCGGCAGCGTCCTTCAAATTTCAGTCCTCTATTCTCAATGCCTTTCATCCCTCCTTCACCAGCTTCGCAAAATTATCAGAGGGAAGTTGCCTCTGAATCAGATTTAGGAGCTCGCCTTGCTGCCAAATCATTATACCAAGAAAAAAAGCAAAGGAAAAAGGATCTCTCCATGCTAGCGGGTCATATTGAGATGAAAAGATCCTCATCACAGGACTCTGTTCCCCCAAGAAAATGCATGCATTGTGAGGTGACAAAGACCCCACAATGGAGAGAGGGGCCTATGGGTCCAAAGACCCTTTGCAATGCTTGTGGTGTTCGATACAGATCCGGCCGCCTCTATCCCGAGTACCGCCCTGCAGCTAGCCCCACTTTTGTAGCATCATTGCACTCAAACTCTCACAAGAAGGTCGTAGAGATGAGAAGCAGAGGCATCCAGCAGACTGTTAGGGGTTCTTTGTCGAACCTTCATGGAAATTATGTTGGATAA 972 0.4558 MSEDVGNNMKDSWFFDKNFNGLSDEAFDDVVNFFDFPLEDVEPNAVDEDWDAQFKRLEEPCFDVFSVSSAGLCAKAQNEKPQLGRNFSASCNEVPPMKQLAQTGGLTYGKTIPIQNLSCNGKDLHQFRTHSPVSVFESSSSSSAENTNFDLPAIPVKRARSRRQRPSNFSPLFSMPFIPPSPASQNYQREVASESDLGARLAAKSLYQEKKQRKKDLSMLAGHIEMKRSSSQDSVPPRKCMHCEVTKTPQWREGPMGPKTLCNACGVRYRSGRLYPEYRPAASPTFVASLHSNSHKKVVEMRSRGIQQTVRGSLSNLHGNYVG* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1917 323 Pfam GATA zinc finger 240 273 IPR000679 GO:0006355|GO:0043565
Aev10g1917 323 PANTHER GATA TRANSCRIPTION FACTOR 13-RELATED 26 304 - -
Aev10g1917 323 ProSiteProfiles GATA-type zinc finger domain profile. 234 270 IPR000679 GO:0006355|GO:0043565
Aev10g1917 323 ProSitePatterns GATA-type zinc finger domain. 240 265 IPR000679 GO:0006355|GO:0043565
Aev10g1917 323 PANTHER GATA TRANSCRIPTION FACTOR 26 304 - -
Aev10g1917 323 SMART GATA_3 234 284 IPR000679 GO:0006355|GO:0043565
Aev10g1917 323 CDD ZnF_GATA 239 286 IPR000679 GO:0006355|GO:0043565
Aev10g1917 323 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 237 297 - -
Aev10g1917 323 Gene3D - 229 313 IPR013088 GO:0006355|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1917 Aev-Chr10 20627432 20630731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1917 16 308 C2C2-Gata Transcription Factor Family AT1G08010 39.130 8.89e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Aev10g1917 GATA 7.8e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1917 - - gmx:100813303 458.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1917 10 20627432 20630731 Aev10g1917 10 20627432 20630731 ECH
Aev10g1917 10 20627432 20630731 Aev04g2999 04 29770839 29783238 ECH
Aev10g1917 10 20627432 20630731 Aev04g2999 04 29770839 29783238 PCT