Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1916 ATGAAGGAAGCTGAGAAGAGCTTGGATCCGCAGCTATGGCACGCTTGCGCCGGTGGCATGGTTCAGATGCCTCCGGTGAACTCGAAAGTTTTCTACTTTCCACAAGGGCATGCCGAGCACGCTCAAACCAACGTTGATCTTGGAGCTCCCCTGAGGATTCCACCACTCATTCTCTGCCGCGTGGCAGGGGTGAAGTACCTTGCCGACCCTGAAACTGATGAAGTCTTTGCAAGGATAAGGTTGGTTCCCCTGAACAATTCAGAGCTTGAATTCGATGATGCTGGTGCCCTTGATGCTAATGTCTCAGAGAATTGTGAAAAGCCTGCATCTTTTGCCAAGACCTTAACTCAATCCGATGCAAACAACGGGGGAGGGTTCTCTGTTCCTAGGTACTGCGCAGAAACCATCTTCCCCCGGCTCGATTACTCTGCCGAGCCTCCGGTTCAAACTGTTATAGCTAAGGATGTTCATGGTGAGGTTTGGAAGTTTAGGCATATATATAGGGGCACACCGAGGAGGCACTTACTCACAACAGGGTGGAGCAGTTTCGTGAACCAGAAGAAACTTGTTGCAGGGGATTCAATTGTGTTCCTGAGGGCTGAAAATGGTGATCTTTGCGTTGGGATCAGGCGTGCCAAGAGAGGAATTGGCAGTGGATCGGAGGCGCCATCAGGGTGGAGCTCTGGCAATGGAGGTAGTTGTGGTGTTGGGCCTTATGGGGCTTTCTCTGCATTCTTGAGAGAGGAGAGCAAGATTCTGAGGAATAATGGTTGCGGGGGGAATTCAAGTCCTTGTGGTGGTGGGAGGGGAAAAGTGTCTCCTGAATCTGTGAGGGAGGCTGTGGCACTTGCTGCTAACAACCAGCCATTCGAAGTTGTTTACTACCCAAGGGCAAGCACACCTGAGTTTTGCATCAAGGCTTCGGCGGTGAGGGCGGCAATGAGAATTCAATGGAGCTCTGGAATGAGGTTTAAAATGGCCTTTGAGACTGAGGATTCTTCCAGGATCAGCTGGTTCATGGGGACCGTTTCTTCTGTTCAGGTTGTTGATCCTATCCGCTGGCCTAATTCCCCTTGGAGGCTTCTTCAGGTTACTTGGGATGAGCCGGATTTGCTACATAATGTGAAGCGAGTGAGCCCTTGGTTGGTTGAATTGGTATCAAACATGCCAGTGATCAATCTCTCACCCTTCTCTCCGCCGAGGAAGAAGCTCCGGTTTCCACCACACCCAGACTTCCCCCTCGACGTTCAATTTCCATTACCGGCGTTTTCAGGCAACCCCCTAGGGCCTAGCAGCCCCTTGTGTTGTCCATCTGATAATGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAAATTGGAATATCTCTTTCAGATCTCTACCTTAACAACAATAAACTGCAGTTGGGGGTGCTTCAGCCGACCGTCCAGCGGCTCGATTTTCACACCGCGATCTCTAATGGCAACAGCATTGCAAACCATGACAAGAGCAAAGAAAGCTTGTCATGCTTGCTGACCATGGGGAATTCCCAAAAGAGTCTGGAGAAATCTGATAATGTGAAGAGACACCAATTTCTGCTTTTCGGTCAACCAATACTCACTGAGCAACAAATCTCTAGAAGGCCTTCTGATGATGGTGATGATGATGATTTGTCGTCTCAGAATTGTGCCGAGAAAAAGAACTCATCATCGTCACCAGATAATGAGAACAAGGACAAACAGAAGTGGTTCTTCAGTGACTCCCAATCCACACTTTCACAGCAGTTTTCACCTGGAAAATCTTCTAGTACTGAGTTATCTTGGCATCTTGGCTTGGATACCGGTCATTGCAAGGTGTTCATGGAGTCAGAAGATGTTGGAAGGACCTTAGACCTGTCACGTCTTGGTTCTTATGAAGAGCTCTATAGGAGACTTGCCAACATGTTTGGATTAGAAAGATCTGAGATGCTGAGTCATGTACTCTACCGTGATTCAACTGGTGCTGTTAAGCCAACCGGAGAAGAACCCTTCAGTGACTTCATGAAGACAGCAAAAAGATTGACAATTCTGACTGATCCCGGCAGCAAGGATGCAAGAAGGGCCTGGATCACAGGAACTAGGAATGGTGAACATGGATTGGATGCATCAAATAAGACGGGTCCTCTTAGCATATTTGCTTAA 2160 0.4875 MKEAEKSLDPQLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQTNVDLGAPLRIPPLILCRVAGVKYLADPETDEVFARIRLVPLNNSELEFDDAGALDANVSENCEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTTGWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGSGSEAPSGWSSGNGGSCGVGPYGAFSAFLREESKILRNNGCGGNSSPCGGGRGKVSPESVREAVALAANNQPFEVVYYPRASTPEFCIKASAVRAAMRIQWSSGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLLQVTWDEPDLLHNVKRVSPWLVELVSNMPVINLSPFSPPRKKLRFPPHPDFPLDVQFPLPAFSGNPLGPSSPLCCPSDNAPAGIQGARHAQIGISLSDLYLNNNKLQLGVLQPTVQRLDFHTAISNGNSIANHDKSKESLSCLLTMGNSQKSLEKSDNVKRHQFLLFGQPILTEQQISRRPSDDGDDDDLSSQNCAEKKNSSSSPDNENKDKQKWFFSDSQSTLSQQFSPGKSSSTELSWHLGLDTGHCKVFMESEDVGRTLDLSRLGSYEELYRRLANMFGLERSEMLSHVLYRDSTGAVKPTGEEPFSDFMKTAKRLTILTDPGSKDARRAWITGTRNGEHGLDASNKTGPLSIFA* 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1916 719 MobiDBLite consensus disorder prediction 536 573 - -
Aev10g1916 719 Gene3D - 606 690 - -
Aev10g1916 719 MobiDBLite consensus disorder prediction 540 555 - -
Aev10g1916 719 Gene3D - 109 213 IPR015300 -
Aev10g1916 719 ProSiteProfiles PB1 domain profile. 607 687 IPR000270 GO:0005515
Aev10g1916 719 SUPERFAMILY DNA-binding pseudobarrel domain 105 218 IPR015300 -
Aev10g1916 719 ProSiteProfiles B3 DNA-binding domain profile. 111 213 IPR003340 GO:0003677
Aev10g1916 719 Pfam B3 DNA binding domain 111 212 IPR003340 GO:0003677
Aev10g1916 719 PANTHER AUXIN RESPONSE FACTOR 2 696 - -
Aev10g1916 719 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 696 IPR044835 GO:0003677|GO:0006355|GO:0009725
Aev10g1916 719 Pfam Auxin response factor 280 363 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Aev10g1916 719 Gene3D - 317 390 - -
Aev10g1916 719 SMART B3_2 111 213 IPR003340 GO:0003677
Aev10g1916 719 CDD B3_DNA 110 211 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1916 Aev-Chr10 20616539 20619154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1916 4 689 B3 DNA Binding Superfamily AT4G30080 60.258 0.0 773
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Aev10g1916 B3 4.7e-22 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1916 - - gmx:100778135 1083.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1916 10 20616539 20619154 Aev10g1916 10 20616539 20619154 ECH
Aev10g1916 10 20616539 20619154 Aev04g3000 04 29798323 29801519 ECH
Aev02g2304 02 23916605 23919136 Aev10g1916 10 20616539 20619154 ECH
Aev10g1916 10 20616539 20619154 Aev04g3000 04 29798323 29801519 PCT