Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1904 ATGAGTTCTGAGGAAACACATGATGCAGCTTCTTGCAAAAGAACAGTTTCACTTCCACTTCACGAGGTTGGTGATTTAATGGGGTTGAATGAAGAAACCTTATCAGATGTTGGTGATTGGAAGAGACAGAATCTTTTCTTGGATATACCCTCAACAACAAGAGCATCATCACAAGAGCCATCTCAGGATTTTGTAGCAATAAAGATGCCACTCACACCAAGTCCAACTCCAACACACAAGAGGGTGAATTTCCTTGTTACTTCTCGCTCTGTTGATGCCCCAATTCCTCCTTCTTCTTCTTCTGGGACTAATTCAGCAGCATCAAGAAGCAAACCATCATCCATAAGAAACATCTTCCCAAAATTGAACCTAAGGTATAGGACAGCATCATCAGATGTTGAAAAGGGTACTACTACTTCTTCTACTGCAGCTCCAGAAGGTTCTTCCTCTTCTGGCCATCAAGAAAATAAGTCTTCAATCTCAAGATCAGTGTCCCTTACTAAGTTATTCACTACCAAGATTAAGAGGACTTCTTCATTACCAGTAGAGGAATTAGGACATTCAAATGCAGATTATGCTCAGAGTGGAAGTATTGCTGCTTCTCCATTTAGAAGAGAGTCTCAGGGGACCATAGCTCGCTCTCAATCAGTGCCTGTCAATACCAAAGAGAAAAACATTAGGAATATGGATTCATATTTTCGCATTATTCGTTCCAATCCTCAAGTGAAGGAAAGGAATGATTGGTTGACCGAGCACACAACAAAAGATACTGAGAACGATGATCCTGATGGTGAAGATATAGCTGAAGAAGAAGCAGTGTGTAGAATTTGTCTGGTTGAACTATGCGAAGGAGGCGAGACATTCAAGATGGAATGCTGCTGCAAAGGTGCACTCGCTCTGGCTCACAAAGAGTGTGCTATCAAATGGTTTACTATCAAGGGTAACAAGACCTGTGATGTGTGCAAGGAGGAGGTTCAGAACCTCTCTGTCACTCTCTTACGGATCCGAAGCGTTCGAGCTCAGAATGCTGGAGCAACATCTCAGCAGGAAAACGATTACAGGGTTTGGCAGGAACTACCAGTTCTTGTTATTGTCAGCATGCTTGCCTATTTCTGTTTCCTTGAGCAGCTTTTGGTTGGGGAAATGGGACACAGTGCAATTTCCTTATCTCTTCCATTTTCATGTGTACTTGGTCTAGTCTCCTCCATCACATCATCAACCATGGTGAAGAGCAAGTTCGTGTGGCTTTATGCATCTGTTCAATTAGCTCTGGTGGTACTCTTTGCACACATATTTTACTCCCTGGTTACACAGAGAGCAATACTGTCAATAGTGCTGGCAGCATTTGCTGGGTTCAGTGTGGTTATGAGTGGAAGTTCAATTCTTGTGGAGATCTCCAGATGGAGAAGTAGTTGGCAGCAGCAACAACAACAACATGAATATGGTTCTCATTCTCAGTCTCAAGTGATGATGATGACACACCCTCAAAATAATGAACACACTTCAAATCAGAGCTAA 1518 0.4249 MSSEETHDAASCKRTVSLPLHEVGDLMGLNEETLSDVGDWKRQNLFLDIPSTTRASSQEPSQDFVAIKMPLTPSPTPTHKRVNFLVTSRSVDAPIPPSSSSGTNSAASRSKPSSIRNIFPKLNLRYRTASSDVEKGTTTSSTAAPEGSSSSGHQENKSSISRSVSLTKLFTTKIKRTSSLPVEELGHSNADYAQSGSIAASPFRRESQGTIARSQSVPVNTKEKNIRNMDSYFRIIRSNPQVKERNDWLTEHTTKDTENDDPDGEDIAEEEAVCRICLVELCEGGETFKMECCCKGALALAHKECAIKWFTIKGNKTCDVCKEEVQNLSVTLLRIRSVRAQNAGATSQQENDYRVWQELPVLVIVSMLAYFCFLEQLLVGEMGHSAISLSLPFSCVLGLVSSITSSTMVKSKFVWLYASVQLALVVLFAHIFYSLVTQRAILSIVLAAFAGFSVVMSGSSILVEISRWRSSWQQQQQQHEYGSHSQSQVMMMTHPQNNEHTSNQS* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1904 505 ProSiteProfiles Zinc finger RING-CH-type profile. 266 328 IPR011016 GO:0008270
Aev10g1904 505 CDD RING_CH-C4HC3_MARCH 274 322 - -
Aev10g1904 505 Pfam RING-variant domain 274 321 IPR011016 GO:0008270
Aev10g1904 505 MobiDBLite consensus disorder prediction 91 114 - -
Aev10g1904 505 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 261 331 IPR013083 -
Aev10g1904 505 MobiDBLite consensus disorder prediction 129 161 - -
Aev10g1904 505 SUPERFAMILY RING/U-box 270 325 - -
Aev10g1904 505 MobiDBLite consensus disorder prediction 92 114 - -
Aev10g1904 505 MobiDBLite consensus disorder prediction 130 161 - -
Aev10g1904 505 MobiDBLite consensus disorder prediction 196 217 - -
Aev10g1904 505 SMART ringv_2 273 322 IPR011016 GO:0008270
Aev10g1904 505 PANTHER OS02G0165000 PROTEIN 31 490 - -
Aev10g1904 505 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 31 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1904 Aev-Chr10 20523988 20526867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1904 258 374 C3H Transcription Factor Family AT2G37950 33.077 1.14e-11 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1904 - - gmx:100815599 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1904 10 20523988 20526867 Aev10g1904 10 20523988 20526867 ECH
Aev10g1904 10 20523988 20526867 Aev04g3016 04 29929048 29933362 PCT