Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1895 ATGGAGGGAGATCAAAAGGCCTCTGACTACACTTTCCCACCTGGTTTCAGATTCCACCCATCTGATGAGGAACTCATAGTTCATTACCTACAAAACAAAATCAGCTCTCGTCCACTTCCAGCATCCATTATAGCTGAGATTGATCTTTATAAGTATAATCCCTGGGATTTACCGAAGAAAGCTTTGTTTGGTGAGGAAGAATGGTACTTCTTTAGCCCGAGAGACCGGAAGTACCCGAACGGGTTAAGGCCAAACAGAGCAGCAGGTTTGGGATACTGGAAAGCAACTGGAACTGACAAACCAATTCTTACTTCTCGTGGATCAAATCGCATAGGGGTGAAGAAAGCTTTGGTTTTCTATTCAGGAAGACCTCCAAAGGGGACTAAGACTGATTGGATCATGAATGAATATAGATTGGTTGACACAGCCATCAAACCTTCTAGGCTAAAAGGTTCTATGCGGTTGGATGACTGGGTACTATGTCGGGTTCGACACAAAGGCTACTTATTAAAGAATTCATGTGAAAATCAAGATGATCAAAACTTGCTATCAGATCTACCAAGGTGTGAAGATTACCCAACAAACATGAATTTTCAGGCCGACATGATCACTGATTATCAGTACAAAGACTGTCATCAGATCATGGCCTCTATCCTTGTTGGTGTTGGCCCTATACCTTCCACTGAGACTGAGAGCTTGTCATGTTTGAACCTTAAGGGAAGCAGAGGAAACGGCCTAACCTCAGTTTTTGAAGATGGTTTCAATAGAGAGAATTCTCAGATGACAATTCCTTCTTTGGACTGTTACTTGAACACAACACTGAAAAGAAAATCTAATGAGGATTATGAGAATCTCATTTCTTTTAACAGCAAGTTCAGCACTGAGAACAAAATAGAGGAATCTTCTAGGACAAATGATAGAGGTTTGAACTGCTATAACCAGAACCACCAGTCTCAAGATGAGATTTTCAATGGGACCGCACCTGAGTCATGCATCAATTTTCAGGAGCTAAATGAATTAGCCTTTGCAGCAAGATACCCTCAATGA 1047 0.4145 MEGDQKASDYTFPPGFRFHPSDEELIVHYLQNKISSRPLPASIIAEIDLYKYNPWDLPKKALFGEEEWYFFSPRDRKYPNGLRPNRAAGLGYWKATGTDKPILTSRGSNRIGVKKALVFYSGRPPKGTKTDWIMNEYRLVDTAIKPSRLKGSMRLDDWVLCRVRHKGYLLKNSCENQDDQNLLSDLPRCEDYPTNMNFQADMITDYQYKDCHQIMASILVGVGPIPSTETESLSCLNLKGSRGNGLTSVFEDGFNRENSQMTIPSLDCYLNTTLKRKSNEDYENLISFNSKFSTENKIEESSRTNDRGLNCYNQNHQSQDEIFNGTAPESCINFQELNELAFAARYPQ* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1895 348 Pfam No apical meristem (NAM) protein 13 139 IPR003441 GO:0003677|GO:0006355
Aev10g1895 348 PANTHER NAC TRANSCRIPTION FACTOR 56 1 307 - -
Aev10g1895 348 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 307 - -
Aev10g1895 348 Gene3D NAC domain 21 169 IPR036093 GO:0003677|GO:0006355
Aev10g1895 348 ProSiteProfiles NAC domain profile. 12 166 IPR003441 GO:0003677|GO:0006355
Aev10g1895 348 SUPERFAMILY NAC domain 9 166 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1895 Aev-Chr10 20457604 20459063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1895 12 166 NAC Transcription Factor Family AT1G61110 71.779 1.58e-80 247
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aev10g1895 NAM 4.1e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1895 - - gmx:100817193 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1895 10 20457604 20459063 Aev10g1895 10 20457604 20459063 ECH