Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1889 ATGGACTTGGTATCAAGTTGCAAGGAAAAGTTGAATTGTTTTCGTTTAAAAGAGCTCAAAGATGTACTCACTCAGTTAGGACTATCTAAGCAGGGAAAGAAGCAGGATCTTGTTTATAGGATATTATCTATTCTTTCAGATGAACAAGTTTCCAAAACGGGGGCTAAGAAAAATGCTGTTGGAAAAGAACATGTGGCAAAACTAGTGGATGACACATATAGAAAATTGCAGGTATCAGAGGCCACTGATCTAGCATCATCAAAGGGACAAGGTGCCTCAGATAGTAGTAATTTGAAAATTAAAGATGAAGTTGATGAGTCCTTTCAGGAAGAGACAAAGATTCGCTGTCTCTGTGGTAGTTCTTTGGAAACTGAGGCAATGATAAAGTGTGAAGATGCAAGATGCCACGTGTGGCAGCACATTAACTGTGTTATTATTCCAGAGAAACCTATGGAAGCAATCTCACCAGTTCCTGATAAATTTTACTGTGAAATCTGTCGATTAAGTCGTGCAGACCCTTTTTGTGATCCAGTGGCCAACCCTTTGTTTCCTGTGAAGTTGACTACAGCCCATATTCCAACTGATGGAACCAACCCAGTGCAGAGTGTGGAGAGAACATTTCAACTTACAAGAGCAGAGAAGGGCTTCGTATCAAGACCAGAATTTGATGTTCAGGCTTGGTGTATGCTTCTGAACGACAAAGTTTCATTTAGGATGCAATGGCCACAATATACTGACTTACAGGTCAATGGTGTTCCTGTTCGTGCAATTAATAGACCTGGTTCACAATTGCTTGGGGCTAACGGTCGTGATGATGGCCCAATTATCACGCCATATATGAAAGACGGAATTAATAAGATTTCCTTAACTGGATGTGATGCTCGCACTTTCTGTTTAGGGGTTCGTATTGTTAAAAGGCACACCTTGCAACAGATCCTTAACATGATTCCAAAGGAGTCTGATGGTGAGCGTTTTGAAGATGCTCTTGCACGTGTATGTAGTTGTATTGGGGGTGGAAATACAAATGATGATGCTGACAGTGACAGTGATTTGGAAGTTGTTTCAGATACTTTTACCATCAACCTTCGTTGTCCAATGAGTGGTTCAAGAATGAAGATTGCAGGAAGGTTCAAACCTTGCGTTCACATGGGTTGTTTTGACCTTGAAATTTTTGTGGAAATGAATCAACGTTCAAGGAAGTGGCAGTGTCCAGTTTGTCTTAAAAACTATACATTGGAGAACATCATTATTGACCCTTATTTTAACCGCATAACTTCTATGATGAGAAATTGTGGAGATGATATTACTGAAATTGAGGTTAAGCCTGATGGTTATTGGCGTGTCAAGGCTAAGAGTGAAAGTGGACGCCGACAGTTGGGGAATCTTGCCCAATGGCACTGCCCTGATGGATCCCTATCTGTTTCTGCTGATGAAGAAGTCAAGAGAGTGGATACTTTGAAGATCAAACAGGAAGATGTTTCAGACATTCCCTCTGGTTTAAGAATTGGCATAAGGAAAAATAATAATGGAGTCTGGGAAGTCAGCAAACCTGAGGACACAAATTCTTCTTCTGGTAATAGATTGAACAAGGATTTCGGAAATCACAATAATGTGGTTATACCAATGAGCAGCAGTGCAACTGGAAGTGGCCGGGATGGTGATGATCCTAGTGTAAACCAGGGTGTTGGTAGGCCTCTTGATTATTCTACTACCAATGGAATTGAGATGGATTCTTTGTGTCACAATAATGCTGATTCAGCTTATGAATATACTGTGCATAACACTTCTGCTCTGGCACCTGATGCAGAAGTTATTGTTCTCAGTGATTCAGATGAAGACAATGATATGCTGGTATCTTCTACAATTGGACACAAAAATAATCAAAGTGGTTCTGCTGATGTTTACTCAGTGCCACTGCCTGGAATTATTGATTCATATACAGAAAATCACAATCTTGTTGGAAACTCGTGCTTGGGGCTTTTTAATAACCCCAATGAAGACGACTATGGGATACCCTCCTCCATTTGGTCATTGCCTTCTGGGACTCAGGCAGGGTCAGGATTCCAATTGTTCAGTACTGATGTGGATGTGTCAGATGCGTTGGTCCATTTGCAGAATGGTGATGTTAATTGCTCCTCATCACTGAATGGTTATACGTTGGCCCCGGATACTGGTTTGGGAACTAGTACTCTTATACTGGATTCATCTGCAGGTCGGTCTGATACTGATTTAAATGGTGGTTTGGTTGACAATCCTTTGGCATTTGCTGGAGAAGATCCCTCACTCCAGATTTTTCTCCCAACAAAACCACTGGAATCATCTAAGCAGCATGAATTGAGAGAACAGGCAGATGTGTCAAATGGTGTGCTCACTGACGATTGGATCTCTCTTAGGCTTGGTGGCAGTACTGCTGGCAGTAATGGTGATGGTTCCATTCCAAATGAATTGAATGCCAGACCGCAAACTACAATTAGAGGAGATGCTACAAATACTTTGACTGATACTGCTTCTTTGGTTCTTGATATGAATGATGACAGATCTGACAAGGCAAGTAGGCAAAGATCTGGTAACCCGTTCTCATTTCCCCGCCAAAAACGTTCAAAACTGAGGAGAGCTGCGCCGCACTATTGGTGTTCAGGAAATGGAAGTTGA 2652 0.4155 MDLVSSCKEKLNCFRLKELKDVLTQLGLSKQGKKQDLVYRILSILSDEQVSKTGAKKNAVGKEHVAKLVDDTYRKLQVSEATDLASSKGQGASDSSNLKIKDEVDESFQEETKIRCLCGSSLETEAMIKCEDARCHVWQHINCVIIPEKPMEAISPVPDKFYCEICRLSRADPFCDPVANPLFPVKLTTAHIPTDGTNPVQSVERTFQLTRAEKGFVSRPEFDVQAWCMLLNDKVSFRMQWPQYTDLQVNGVPVRAINRPGSQLLGANGRDDGPIITPYMKDGINKISLTGCDARTFCLGVRIVKRHTLQQILNMIPKESDGERFEDALARVCSCIGGGNTNDDADSDSDLEVVSDTFTINLRCPMSGSRMKIAGRFKPCVHMGCFDLEIFVEMNQRSRKWQCPVCLKNYTLENIIIDPYFNRITSMMRNCGDDITEIEVKPDGYWRVKAKSESGRRQLGNLAQWHCPDGSLSVSADEEVKRVDTLKIKQEDVSDIPSGLRIGIRKNNNGVWEVSKPEDTNSSSGNRLNKDFGNHNNVVIPMSSSATGSGRDGDDPSVNQGVGRPLDYSTTNGIEMDSLCHNNADSAYEYTVHNTSALAPDAEVIVLSDSDEDNDMLVSSTIGHKNNQSGSADVYSVPLPGIIDSYTENHNLVGNSCLGLFNNPNEDDYGIPSSIWSLPSGTQAGSGFQLFSTDVDVSDALVHLQNGDVNCSSSLNGYTLAPDTGLGTSTLILDSSAGRSDTDLNGGLVDNPLAFAGEDPSLQIFLPTKPLESSKQHELREQADVSNGVLTDDWISLRLGGSTAGSNGDGSIPNELNARPQTTIRGDATNTLTDTASLVLDMNDDRSDKASRQRSGNPFSFPRQKRSKLRRAAPHYWCSGNGS* 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1889 883 MobiDBLite consensus disorder prediction 513 565 - -
Aev10g1889 883 Pfam PHD-finger 115 167 IPR019787 -
Aev10g1889 883 SMART sap_9 11 45 IPR003034 -
Aev10g1889 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 448 IPR013083 -
Aev10g1889 883 ProSiteProfiles Zinc finger SP-RING-type profile. 347 430 IPR004181 GO:0008270
Aev10g1889 883 CDD PHD_Bye1p_SIZ1_like 115 166 - -
Aev10g1889 883 PANTHER E3 SUMO-PROTEIN LIGASE SIZ1 9 825 - -
Aev10g1889 883 ProSitePatterns Zinc finger PHD-type signature. 116 166 IPR019786 -
Aev10g1889 883 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Aev10g1889 883 SUPERFAMILY SAP domain 1 63 IPR036361 -
Aev10g1889 883 MobiDBLite consensus disorder prediction 513 554 - -
Aev10g1889 883 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 825 - -
Aev10g1889 883 SMART PHD_3 115 167 IPR001965 -
Aev10g1889 883 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 104 172 IPR013083 -
Aev10g1889 883 Gene3D SAP domain 1 60 IPR036361 -
Aev10g1889 883 Pfam MIZ/SP-RING zinc finger 360 408 IPR004181 GO:0008270
Aev10g1889 883 MobiDBLite consensus disorder prediction 839 883 - -
Aev10g1889 883 SUPERFAMILY FYVE/PHD zinc finger 107 170 IPR011011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1889 Aev-Chr10 20424385 20432015 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev10g1889 PHD 6.1e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1889 - - gmx:100793735 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1889 10 20424385 20432015 Aev10g1889 10 20424385 20432015 ECH
Aev10g1889 10 20424385 20432015 Aev04g3035 04 30093311 30104423 PCT