Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1882 ATGGAGGGAAGTGACACAAACACCCCTATGAAAGTTTCAAGTGATCCCCAAGTAGGAGTAGTATCTCCCACAAACTCCTCATCATGTTCTCAAGTACAAGTAGTGATGAGCCCTTGTGCTGCTTGCAAGATCTTGAGGAGAAGATGTGCTGAGAAATGTGTGCTCGCACCGTATTTCCCTCCAACTGAACCTGCCAAGTTCACCACTGCTCACCGAGTTTTTGGAGCCAGTAACATCATCAAGTTCTTACAGGAACTTCCGGAAAGTCAAAGGGCAGATGCGGTGACGAGCATGGTGTACGAGGCAGGAGCAAGAATAAGGGACCCAGTATATGGGAGTGCAGGGGCAATATGTCAGCTGCAAAAACAAGTGAATGAGCTTCAAGCACAGCTGGCAAAGGCTCAAGCTGAGCTTGTCAACATGCAGCTCCAACAGGCCAATCTCGTCGCTCTTATTTGCATGCAAATGGCTGATCCCAATAACAATAATAATATTCATCATCCAACAATAATGCAGCATCAGCGTGAAGATCATGAACCTTCTTCACCACAACAACCAGTGGACAATTTCATCATTTCAAGCCCTCCACACGCCCCTGCAGGCTATCATCATCATCATCAAAACCACAACAATAATAATAATCTCAACTTTTTCTTTGAGGAGAGCACTACTACTAGCCTGATGAACTCAATGTGGGAGCCTCTCTGGACATGA 714 0.458 MEGSDTNTPMKVSSDPQVGVVSPTNSSSCSQVQVVMSPCAACKILRRRCAEKCVLAPYFPPTEPAKFTTAHRVFGASNIIKFLQELPESQRADAVTSMVYEAGARIRDPVYGSAGAICQLQKQVNELQAQLAKAQAELVNMQLQQANLVALICMQMADPNNNNNIHHPTIMQHQREDHEPSSPQQPVDNFIISSPPHAPAGYHHHHQNHNNNNNLNFFFEESTTTSLMNSMWEPLWT* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1882 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 22 174 - -
Aev10g1882 237 Coils Coil 117 144 - -
Aev10g1882 237 Pfam Lateral organ boundaries (LOB) domain 38 135 IPR004883 -
Aev10g1882 237 ProSiteProfiles LOB domain profile. 37 138 IPR004883 -
Aev10g1882 237 MobiDBLite consensus disorder prediction 172 209 - -
Aev10g1882 237 PANTHER LOB DOMAIN-CONTAINING PROTEIN 1 22 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1882 Aev-Chr10 20359524 20361438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1882 34 237 AS2 family AT2G28500 56.863 1.60e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev10g1882 LOB 1.6e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1882 - - gmx:100819336 259.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1882 10 20359524 20361438 Aev10g1882 10 20359524 20361438 ECH
Aev10g1882 10 20359524 20361438 Aev04g3044 04 30170392 30172405 ECH
Aev10g1882 10 20359524 20361438 Aev04g3044 04 30170392 30172405 PCT