Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1873 ATGATGTTTGATCTCAACCTGAATGCCGATTCGACTCAGAACGACCACGACTCGCCCGTTCTGCTGGAGGAGAAACTTCCTGAGGCTTCCTCAGGGACCTCGAATTCCTCCGTTGTGAATGCGGAGGGTTCAAGCAACGGCGGCGGCGGCGACGACGACTCATGCTCCACGCGCGCCACCGGAAGCGGCGTCGTCACCTTCAATTTCGATATCCTGAAGGTGGAAGGAGGAAACGACGCGACAAAGGAGCTGTTCCCGGTGGGTGCCGGGAATTTCCAGGGGCAGCCTTCGACGTCGTCGTTTCCGGCGAGGAAGAGCTGGATGGATCTGTCGCTGGATCAACATAGTGGCGAAAACGGTGAAATGAAGAAGATGGTTCTGGTTCAGCAACAACAACAACAACAGCCTCCGCAGGCGAAGAAGAGCAGGAGGGGACCACGGTCTCGGAGCTCGCAGTACAGAGGAGTCACCTTCTATAGGAGGACCGGAAGATGGGAATCGCATATCTGGGATTGCGGAAAACAAGTCTATTTGGGTGGATTTGACACAGCTCATGCAGCTGCTAGAGCCTATGATCGAGCTGCTATCAAGTTCAGGGGACTTGATGCTGACATCAATTTTAACCTCGTTGACTATGAGGAGGATCTTAAACAGATGAAGAATCTCTCAAAGGAGGAATTTGTGCACATACTCCGTCGCCAAAGCACTGGTTTCTCAAGGGGGAGTTCAAAATACAGAGGAGTGACACTTCACAAATGTGGACGGTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGACAAGGCAGCTATCAAATGTAATGGAAGGGAAGCAGTCACTAACTTTGAGCCGAGTACATATGAAGGCGAGATAAAACCTGAAGCCATTAATAAAGGTGGCAGTCACAATCTTGATCTCAATTTGGGAATAGCGACCCCAGGACACGGTCCCAAAGAAACCAGGGAGCCTCTTCAGTTCCAGTCCGTTCCCTACAACGCACATCCCGGAAGAAGTTCAAGGATGGAGACTAATGTTAATTCAGTTAATGGTGATCCTTCTTTGAAAAGGATGGTTGTAACTGAAGAGCGTCCTTCTGTATGGAATGCCACATATTCGACTTTCTTTCCCAATGAGGAAAGAGCAGAGAGAATCGGCATAGATCCTTCACATGGAGTCCCCAACTGGGCGTGGCAAACTCATGGTCAGGTCACGGCCACCGCCACCCCGGTACCGGTACCGTTCTCTACTGCAGCATCATCAGGATTCTCCATTTCAGCTACCTTCCCATCGACTGCCATGTTTCTGACGAAATCTATGAACTCAGTTCCTCAGAGCCTCTGTTTTACTTCAGCCAGCGCAACTGGTAGCAATGCACCTCAGTATTATTACCAGGTGAAGTCCCCGCATGCACCATCGTAG 1428 0.5056 MMFDLNLNADSTQNDHDSPVLLEEKLPEASSGTSNSSVVNAEGSSNGGGGDDDSCSTRATGSGVVTFNFDILKVEGGNDATKELFPVGAGNFQGQPSTSSFPARKSWMDLSLDQHSGENGEMKKMVLVQQQQQQQPPQAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGLDADINFNLVDYEEDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSTYEGEIKPEAINKGGSHNLDLNLGIATPGHGPKETREPLQFQSVPYNAHPGRSSRMETNVNSVNGDPSLKRMVVTEERPSVWNATYSTFFPNEERAERIGIDPSHGVPNWAWQTHGQVTATATPVPVPFSTAASSGFSISATFPSTAMFLTKSMNSVPQSLCFTSASATGSNAPQYYYQVKSPHAPS* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1873 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 2 442 - -
Aev10g1873 475 SUPERFAMILY DNA-binding domain 151 208 IPR016177 GO:0003677
Aev10g1873 475 MobiDBLite consensus disorder prediction 1 57 - -
Aev10g1873 475 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-7 2 442 - -
Aev10g1873 475 ProSiteProfiles AP2/ERF domain profile. 152 208 IPR001471 GO:0003700|GO:0006355
Aev10g1873 475 MobiDBLite consensus disorder prediction 1 16 - -
Aev10g1873 475 MobiDBLite consensus disorder prediction 28 57 - -
Aev10g1873 475 MobiDBLite consensus disorder prediction 127 153 - -
Aev10g1873 475 CDD AP2 243 288 IPR001471 GO:0003700|GO:0006355
Aev10g1873 475 CDD AP2 152 207 IPR001471 GO:0003700|GO:0006355
Aev10g1873 475 MobiDBLite consensus disorder prediction 127 141 - -
Aev10g1873 475 Pfam AP2 domain 152 200 IPR001471 GO:0003700|GO:0006355
Aev10g1873 475 Gene3D AP2/ERF domain 243 287 IPR036955 GO:0003700|GO:0006355
Aev10g1873 475 Gene3D AP2/ERF domain 151 210 IPR036955 GO:0003700|GO:0006355
Aev10g1873 475 SUPERFAMILY DNA-binding domain 243 287 IPR016177 GO:0003677
Aev10g1873 475 SMART rav1_2 152 214 IPR001471 GO:0003700|GO:0006355
Aev10g1873 475 SMART rav1_2 244 292 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1873 Aev-Chr10 20286831 20290303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1873 2 436 AP2-EREBP Transcription Factor Family AT5G60120 48.701 1.03e-100 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Aev10g1873 AP2 2.5e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1873 K09284 - gmx:100777102 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1873 10 20286831 20290303 Aev10g1873 10 20286831 20290303 ECH
Aev10g1873 10 20286831 20290303 Aev04g3059 04 30325944 30329189 ECH
Aev10g1873 10 20286831 20290303 Aev04g3059 04 30325944 30329189 PCT