Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1859 ATGTATGCACACTCCAACACCTCATCATCATCACCCTCACTTCAAATGCAAATGCAACTCACCCTCACCGAGTTCGACTCGAGGAGCCTTAGCAGCCACACTCTCCACCACCACCACCACCCCTTTTCCTCTCTCTTCGCTCAGCTCTTCGACGACTCCGACCACGCTCCTCTCAGGAGAGTTTACAGTGCCGGTGATCTCCAGCAGGGGATTAATGGAATGCAACAGAATAATGCTCATCGGTCAGATAGTCCATTGTCAAGCGAAAGCAGTATGATCATAGAAGGGATGAGCAGAGCCTGCAGATATACCCCCGAAGAGAAGAAGATTAGGATTCAGAGGTACAGAACCAAGAGAAACCAGAGGAACTTCAACAAGAAAATTAAGTATGCTTGCAGGAAAACATTGGCAGACAGTAGGCCACGAATCAGAGGAAGGTTTGCAAGAAATGATGAAATTGACAAGAACCCCCAATTATTAGTTCATCAGTGGAGCCATATTGATCATCATGAAGAAGATGAACAAGAAGATGAGAATTGGGTCAGTATCTTTGATTCCTTAGTGGCTGCGAATCTGGATCAGGAGTCTCAAGGAAGTTCTTCCTTTGGTTCATTGTATTAA 621 0.4557 MYAHSNTSSSSPSLQMQMQLTLTEFDSRSLSSHTLHHHHHPFSSLFAQLFDDSDHAPLRRVYSAGDLQQGINGMQQNNAHRSDSPLSSESSMIIEGMSRACRYTPEEKKIRIQRYRTKRNQRNFNKKIKYACRKTLADSRPRIRGRFARNDEIDKNPQLLVHQWSHIDHHEEDEQEDENWVSIFDSLVAANLDQESQGSSSFGSLY* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1859 206 ProSiteProfiles CCT domain profile. 108 150 IPR010402 GO:0005515
Aev10g1859 206 Pfam CCT motif 111 150 IPR010402 GO:0005515
Aev10g1859 206 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 5 206 IPR045281 GO:0009909
Aev10g1859 206 PANTHER CCT MOTIF PROTEIN 5 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1859 Aev-Chr10 20190021 20191510 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1859 107 171 C2C2-CO-like Transcription Factor Family AT5G57660 43.077 2.22e-12 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aev10g1859 CCT 8.1e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1859 - - gmx:102661609 243.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1859 10 20190021 20191510 Aev10g1859 10 20190021 20191510 ECH
Aev10g1859 10 20190021 20191510 Aev04g3077 04 30532267 30534568 PCT