Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1840 ATGGTTCAGCAGGAAGTAGTCCGAAAAGGCCCGTGGACAGAACAAGAGGACTTCAAGTTGGTGTCGTTTGTTGGCTTGTTCGGAGACAGAAAATGGGACTTTATTGCTAAGGTTTCAGGTTTGAATAGGACTGGTAAGAGCTGCAGGTTGCGTTGGGTTAATTACCTCCACCCTGGCCTCAAGCGTGGCAAGATGACTCCTCAGGAAGAGCGCCTCGTCCTCGACCTTCACTCCAAATGGGGCAATAGATGGTCAAGAATTGCTCGCAAGTTGCCTGGTCGTACAGACAATGAGATCAAGAACTACTTCAGGACTCACATGAGGAAGAAGAAGGCAGAGGAGGAAAAGCGAGCAGCGTATATTCCATCACCAACTTCCTCAAGTTGTCACTCCTCCTCGGTGTCCTCGAACAACCATGCTGTTGATTCACATGCTTCCAAGAAAGCCGGAGAGGAGAGCTTCTATGACACAGGAGGACCTAACACCACCATGGGGGGATCATCATCATCATCCTCAACCGATGCTATTAAGATCAAAGTAGGAGAAGAAGGGGGGTTCTCTATGGATGATATATGGAAAGATATTGAAATGTCAGAAGAGAATAATATTCTGCAGCCAGCAGCAGTGTACGAGGGGCACAGTAGTGAAGAAGGTTGCAACTTCTCTGCTTGCCCTCCACCACCACCAGTGCCTTCTCCATCATCATGGGAGTATTCTACTACAGACCCACTTTGGGCGATGGATGAACAAAGCATGTTATTCCCTATAAGTGACCCTTATTTTTTGTGCTATTCACAAGTAGGCAACGCATTTCTAACCGGCTAG 825 0.4764 MVQQEVVRKGPWTEQEDFKLVSFVGLFGDRKWDFIAKVSGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLDLHSKWGNRWSRIARKLPGRTDNEIKNYFRTHMRKKKAEEEKRAAYIPSPTSSSCHSSSVSSNNHAVDSHASKKAGEESFYDTGGPNTTMGGSSSSSSTDAIKIKVGEEGGFSMDDIWKDIEMSEENNILQPAAVYEGHSSEEGCNFSACPPPPPVPSPSSWEYSTTDPLWAMDEQSMLFPISDPYFLCYSQVGNAFLTG* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1840 274 Pfam Myb-like DNA-binding domain 9 56 IPR001005 -
Aev10g1840 274 Pfam Myb-like DNA-binding domain 62 106 IPR001005 -
Aev10g1840 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 111 IPR017930 -
Aev10g1840 274 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 4 56 IPR017930 -
Aev10g1840 274 MobiDBLite consensus disorder prediction 121 143 - -
Aev10g1840 274 CDD SANT 64 107 IPR001005 -
Aev10g1840 274 ProSiteProfiles Myb-like domain profile. 57 107 IPR001005 -
Aev10g1840 274 PANTHER TRANSCRIPTION FACTOR MYB48-RELATED 3 253 - -
Aev10g1840 274 CDD SANT 11 56 IPR001005 -
Aev10g1840 274 MobiDBLite consensus disorder prediction 156 173 - -
Aev10g1840 274 ProSiteProfiles Myb-like domain profile. 4 56 IPR001005 -
Aev10g1840 274 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 253 IPR044676 GO:0003700|GO:0006355|GO:0043565
Aev10g1840 274 SMART sant 61 109 IPR001005 -
Aev10g1840 274 SMART sant 8 58 IPR001005 -
Aev10g1840 274 MobiDBLite consensus disorder prediction 113 173 - -
Aev10g1840 274 Gene3D - 64 130 - -
Aev10g1840 274 Gene3D - 9 61 - -
Aev10g1840 274 SUPERFAMILY Homeodomain-like 8 103 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1840 Aev-Chr10 20078577 20079599 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1840 4 248 MYB Transcription Factor Family AT5G59780 56.735 1.33e-79 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g1840 Myb_DNA-binding 2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1840 K09422 - gmx:100776886 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1840 10 20078577 20079599 Aev10g1840 10 20078577 20079599 ECH
Aev04g3101 04 30719021 30725492 Aev10g1840 10 20078577 20079599 PCT