Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1837 ATGAAGAGAGGAAGAGAAGAGGTGAGTAGTGAGGAGGTAGATATGGCTAATAGTTGTTTGATGCTATTGAACAAAGTTGGTGAAAGTGATGAGATTCGTTCATTGAGGGAGGAGAGAGATCAAAAGGGTGGTGATTTTAAGTGCAAAACTTGCAATAGAAGATTCAATTCTTTTCAAGCCCTTGGAGGACACAGAGCAAGCCACAAGAAGCCCAAGCTCATGGTTTCAGACCTGTCATGTCATATTCATCAGTTACCGGGCTCAAAGCCCAGGATGCACCTTTGTCCTATTTGTGGGCTTGAGTTTTCGATTGGACAAGCACTTGGAGGGCACATGAGAAAGCACAGGGTTGCTAACAATGATGATGATGATCACAATAATATGATGCTGAATATTCGTAGTAAGCATGCCTTGCCAATCTTGAAGGAATCCAAAGATGATGATATTAATAATAAGAGGAGGATGAATTTGTGCCTGGACTTGAATTTGCCGCCATTGGAGAATGATCTTAAGCTTGACATAAGGATGCCTGTTCTTAATATTGTTTCATTTGATTGA 558 0.4086 MKRGREEVSSEEVDMANSCLMLLNKVGESDEIRSLREERDQKGGDFKCKTCNRRFNSFQALGGHRASHKKPKLMVSDLSCHIHQLPGSKPRMHLCPICGLEFSIGQALGGHMRKHRVANNDDDDHNNMMLNIRSKHALPILKESKDDDINNKRRMNLCLDLNLPPLENDLKLDIRMPVLNIVSFD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1837 185 ProSiteProfiles Zinc finger C2H2 type domain profile. 46 73 IPR013087 -
Aev10g1837 185 Gene3D Classic Zinc Finger 43 115 - -
Aev10g1837 185 PANTHER ZINC FINGER PROTEIN ZAT5 9 175 - -
Aev10g1837 185 SUPERFAMILY beta-beta-alpha zinc fingers 46 115 IPR036236 -
Aev10g1837 185 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Aev10g1837 185 PANTHER CYS2-HIS2 ZINC FINGER TRANSCRIPTION FACTOR 9 175 - -
Aev10g1837 185 ProSitePatterns Zinc finger C2H2 type domain signature. 48 68 IPR013087 -
Aev10g1837 185 Pfam C2H2-type zinc finger 46 71 - -
Aev10g1837 185 Pfam C2H2-type zinc finger 93 116 - -
Aev10g1837 185 SMART c2h2final6 46 68 IPR013087 -
Aev10g1837 185 SMART c2h2final6 93 115 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1837 Aev-Chr10 20061951 20062508 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1837 1 172 C2H2 Transcription Factor Family AT2G37430 42.045 1.67e-32 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g1837 zf-C2H2_6 5.1e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1837 - - gmx:100813871 182.185
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1837 10 20061951 20062508 Aev10g1837 10 20061951 20062508 ECH