Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1833 ATGTCTGCGGCTCTCGATATGACCCTCGACGACATCATTAAGAACAACAAGAAGTCCGGATCCGGCGCCTCCCGTGGCCGCGGCCGACAATCCGGATCCGGACCTGGACCTGCCCGCCGCCTTCCAAACCGCGCCGCCAACCGAGCTGCACCCTACAGCACCGCCAAGGCGCCGGAGACAGCGTGGCAGCATGACATGTATGCAGATCAGGGAGTGGGTGCAGGAGCGTTCTCTGGGCAGGCTGGTCGAGCGTCTTCCATTGAAACAGGGACGAAGCTCTACATTTCGAATTTGGATTACGGTGTTTCCAATGATGATATCAAGGAATTATTTTCTGAAGTTGGTGACATCAAACGGCACACCGTGCATTACGACAGGAGTGGGAGATCGAAGGGTACAGCAGAAGTAGTCTTCTCGCGACGAGCTGATGCTGTAGCTGCAGTCAAGAGGTACAATAATGTCCAACTAGATGGAAAACCAATGAAGGTAGAGATTGTTGGAACAAACATTGCAACAAATGCTGTTGCTCCTGCTGTTAATGGAGGTTTTGGAAATCCAAATGGAGTTCCCAGAAGTGGACAAGGGAGAAGTGGAGGCCCTGTAGGACGGCCACGTGGTGGAGGAGTTAGAGGGCGTGGCGCTCAAAGAGGTCGAGGGCGTGGAAGAGGAGGTCGTGGTGAAAAAGTATCTGCAGATGATCTTGATGCTGATTTGGAGAAGTACCATGCAGAGGCAATGCAATTAAACTGA 750 0.5267 MSAALDMTLDDIIKNNKKSGSGASRGRGRQSGSGPGPARRLPNRAANRAAPYSTAKAPETAWQHDMYADQGVGAGAFSGQAGRASSIETGTKLYISNLDYGVSNDDIKELFSEVGDIKRHTVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKPMKVEIVGTNIATNAVAPAVNGGFGNPNGVPRSGQGRSGGPVGRPRGGGVRGRGAQRGRGRGRGGRGEKVSADDLDADLEKYHAEAMQLN* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1833 249 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 1 248 - -
Aev10g1833 249 MobiDBLite consensus disorder prediction 1 57 - -
Aev10g1833 249 Pfam C-terminal duplication domain of Friend of PRMT1 192 243 IPR025715 -
Aev10g1833 249 SMART FoP_duplication_2 180 249 IPR025715 -
Aev10g1833 249 SUPERFAMILY RNA-binding domain, RBD 22 165 IPR035979 GO:0003676
Aev10g1833 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 91 168 IPR000504 GO:0003723
Aev10g1833 249 CDD RRM_THOC4 91 165 - -
Aev10g1833 249 PANTHER CHROMATIN TARGET OF PRMT1 PROTEIN-RELATED 1 248 - -
Aev10g1833 249 SMART rrm1_1 92 164 IPR000504 GO:0003723
Aev10g1833 249 MobiDBLite consensus disorder prediction 220 236 - -
Aev10g1833 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 93 161 IPR000504 GO:0003723
Aev10g1833 249 Gene3D - 78 232 IPR012677 -
Aev10g1833 249 MobiDBLite consensus disorder prediction 182 236 - -
Aev10g1833 249 MobiDBLite consensus disorder prediction 14 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1833 Aev-Chr10 20047400 20049130 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1833 90 165 Eukaryotic Initiation Factors Gene Family AT2G23350 38.158 1.36e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1833 K12881 - gmx:100775827 311.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1833 10 20047400 20049130 Aev10g1833 10 20047400 20049130 ECH