Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1825 ATGGAGAGCCAGAAGGGTAATAGTGGAGAGGCAGAGAATAATGTGGGAGTGGGAGTGGGAGTGGGAGGGTCAAGTGGTGGCGGGAATAATACATCATCAGGATCGCGATGGAACCCGACGAAGGAGCAAATAAGCATGCTGGAGAATCTGTATAAGCAGGGGATAAGGACTCCAAGCGCAGAGCAGATTGAGCAGATAACGGCCAGGCTTAGGGCCTATGGGCAGATCGAAGGCAAGAATGTGTTCTACTGGTTTCAGAATCACAAGGCCAGGCAGAGGCAGAGGCAGAAGCAGCAGCAACTACAATCCAATAACAACGCCTTTTTCAATCGCTTTCTCCATACGCCTCACCCTCCTCCTTTCTCTTCTCCACTCTGCCAAAATGTGGTGTGCACCCCATCGCCATTTTGCTTGCCGCAGAGTGATTTTGGGTTCTACCCTCAACCTCCAAATATGCTTGAAACTGGGCCTATTAGCCCACGGGCTGAGAACGTTGGTGGGCCCATGATGGTTGTGATGCCAAGAATGTATGATGGCCGGCCCATATACGACCCATGGCAGCAGAGAATCCCAGATTACAGCATTTGCCACAGTAACCCAAAAACGTTGGATCTGTTTCCGCAGCATCCAACTGGCACTATGGAAGAAGGCAAAACAACAGAGCATGTGGTATCCGCTGAAAACCAGCCTTGCTTTGATTTTTTCACTTTGGGGAAAGGGCCTCGTTTTACTGATTAA 738 0.5 MESQKGNSGEAENNVGVGVGVGGSSGGGNNTSSGSRWNPTKEQISMLENLYKQGIRTPSAEQIEQITARLRAYGQIEGKNVFYWFQNHKARQRQRQKQQQLQSNNNAFFNRFLHTPHPPPFSSPLCQNVVCTPSPFCLPQSDFGFYPQPPNMLETGPISPRAENVGGPMMVVMPRMYDGRPIYDPWQQRIPDYSICHSNPKTLDLFPQHPTGTMEEGKTTEHVVSAENQPCFDFFTLGKGPRFTD* 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1825 245 MobiDBLite consensus disorder prediction 24 39 - -
Aev10g1825 245 Pfam Homeodomain 35 94 IPR001356 GO:0003677
Aev10g1825 245 CDD homeodomain 36 90 IPR001356 GO:0003677
Aev10g1825 245 Gene3D - 28 95 - -
Aev10g1825 245 ProSiteProfiles 'Homeobox' domain profile. 30 95 IPR001356 GO:0003677
Aev10g1825 245 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 24 223 IPR044555 GO:0003700|GO:0099402
Aev10g1825 245 SUPERFAMILY Homeodomain-like 26 102 IPR009057 -
Aev10g1825 245 SMART HOX_1 32 99 IPR001356 GO:0003677
Aev10g1825 245 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 24 223 - -
Aev10g1825 245 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1825 Aev-Chr10 20010376 20011376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1825 31 141 Wox Gene Family AT5G59340 64.348 2.63e-44 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aev10g1825 Homeodomain 5.4e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1825 - - pvu:PHAVU_011G064900g 201.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1825 10 20010376 20011376 Aev10g1825 10 20010376 20011376 ECH