Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1821 ATGGAGGAGGAGAAAGTGGGCACAGCTGAGACGCTGATTGACCTGGTCAATGACATATCTTCGATCTCCGATTACAAGGCCACCGTCAAGAAGGAGTACTGTAACTTGGCTAGGAGGTTGAAGCTTTTGACGCCATTGTTCGAAGAGATTAGGGACTGTAAGGATCCGATGCCTGAGGAAACTTCCAAGGCTTTGCTTTCCTTGAAGGAAGCCATGGAATCCGCCAAGGACCTACTCAGATTCGGGAGTGAAGGCAGCAAGATTTACATGGTCCTTGAGAGAGACCAAATTATGAATAAATTCCATGAGGTGACTGCTCAATTGGAACAAGCGTTGGGTGAGATTTCCTTTGACAAACTTGACATATCAGATGAAGTTAAGGAGCAGGTTGAGCTTGTTCTTGCCCAGTTTAGAAGAGCCAAAGGAAGGGTTGATGCAGCTGATGCTGAGTTGTATGAAGATCTTCTGTCCCTTTACGACAATAGCAGTGATGCAGCGACGGATGCAACTGTTTTACAGAGATTAGCTGAAAAACTGCAATTGATTGGAATAGCTGATCTTACACAAGAGTCACTAGCTTTAGATGAGATGGTCACTGCAAGTGGTGGGGATCCTGGGGCAAGCATTGAGAAGATGTCAATGTTATTGAAAAAGATAAAGGATTATGTACAAACACAAAATCTAGACAAGGATGATAGTTTAGGAGGAAACAGCCTTTCTTCAAGTTGCTACAATCACGGGACAAATGAAAACAATCATCAGCCTCCAGTAATCCCTGATGATTTTCGATGTCCGATTTCACTGGAATTGATGAAGGATCCTGTCATAGTATCAACAGGACAGACTTATGAGCGTTCTTGTATAGAGAAGTGGTTGGAAGCAGGGCATGGTACCTGCCCAAAAACACAGCAGGCCCTCTCCAGTACTGTTCTTACACCCAACTATGTATTACGAAGCCTTATAGCACAATGGTGTGAAGCCAATGGCATAGAACCACCAAAACGACCTAGCAGTTCTCGGCCCAGTAAATCAGCATCTGCCTGCACACCAGCTGAGCAAAGTAAGATTGAAAATCTTCTTCGAAAGCTCACGTCTGGCAATCCTGAAGATCAGAGATCTGCTGCGGGTGAGATCCGCCTTCTTGCGAAGCGTAATGCAGACAACCGTGTAGCCATTGCTGAAGCTGGTGCAATACCACTTCTTGTTGGTCTTCTCTGTACACCTGACTCCCGGATCCAAGAGCATGCTGTTACAGCACTTCTGAATCTTTCCATATGTGAAAATAACAAAGGAAGCATCATATCTTCTGGGGCAGTGCCAGGCATAGTTCATGTGCTCAAGAAGGGAAGCATGGAAGCCCGGGAAAATGCAGCAGCAACTCTTTTCAGCCTTTCCGTTATTGATGAAAATAAGGTTGTAATTGGTAATTTCGGAGCCATACCACCATTAGTGACACTGCTGAGTGAGGGTACCCAGAGGGGTAAGAAAGATGCTGCAACGGCACTCTTCAATTTATGCATTTACCAGGGTAACAAAGGAAAGGCGGTGAGAGCCGGTGTTGTTCCTACGCTTATGCGACTGCTGACCGAACCTGGTGGGGGAATGGTGGATGAAGCATTAGCCATTCTGGCAATATTGGCTAGCCATCCAGATGGGAAGGCCGCAATTGGTGCCGCAGAGGCAGTGCCTGTGTTGGTGGAGGTTATCGGGAATGGATCCCCAAGGAACAAAGAGAATGCAGCTGCTGTTATGGTGCACCTCTGTTCTGGAGATAAACAATATATAGTTCAGGCACAAGAGCTAGGGGTGATGGGTCCATTGTTGGAGTTAGCTCAAAATGGCACAGACAGAGGCAAAAGAAAGGCTGCACAATTGCTAGAGCGTATGAGCAGGTTCCTTGAACAACAACATCAGCAGGAGCAAGAGGAAGTTCAAACACAAGCTGAAGTTCAAGCTCAGAACAACCAGGATACCCCTCTTCCTCCTATTACTACTAACCTTGATGATAGCTGA 2013 0.461 MEEEKVGTAETLIDLVNDISSISDYKATVKKEYCNLARRLKLLTPLFEEIRDCKDPMPEETSKALLSLKEAMESAKDLLRFGSEGSKIYMVLERDQIMNKFHEVTAQLEQALGEISFDKLDISDEVKEQVELVLAQFRRAKGRVDAADAELYEDLLSLYDNSSDAATDATVLQRLAEKLQLIGIADLTQESLALDEMVTASGGDPGASIEKMSMLLKKIKDYVQTQNLDKDDSLGGNSLSSSCYNHGTNENNHQPPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEAGHGTCPKTQQALSSTVLTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSKSASACTPAEQSKIENLLRKLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLCTPDSRIQEHAVTALLNLSICENNKGSIISSGAVPGIVHVLKKGSMEARENAAATLFSLSVIDENKVVIGNFGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEALAILAILASHPDGKAAIGAAEAVPVLVEVIGNGSPRNKENAAAVMVHLCSGDKQYIVQAQELGVMGPLLELAQNGTDRGKRKAAQLLERMSRFLEQQHQQEQEEVQTQAEVQAQNNQDTPLPPITTNLDDS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1821 670 PANTHER U BOX DOMAIN-CONTAINING 7 647 - -
Aev10g1821 670 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 331 IPR013083 -
Aev10g1821 670 MobiDBLite consensus disorder prediction 639 670 - -
Aev10g1821 670 CDD RING-Ubox_PUB 262 304 IPR045210 -
Aev10g1821 670 Pfam Armadillo/beta-catenin-like repeat 385 424 IPR000225 GO:0005515
Aev10g1821 670 Pfam Armadillo/beta-catenin-like repeat 468 506 IPR000225 GO:0005515
Aev10g1821 670 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Aev10g1821 670 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 7 647 - -
Aev10g1821 670 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 396 438 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 426 466 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 385 425 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 591 631 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 508 548 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 549 589 IPR000225 GO:0005515
Aev10g1821 670 SMART arm_5 467 507 IPR000225 GO:0005515
Aev10g1821 670 Gene3D - 342 659 IPR011989 -
Aev10g1821 670 Coils Coil 622 643 - -
Aev10g1821 670 MobiDBLite consensus disorder prediction 635 670 - -
Aev10g1821 670 Gene3D - 5 118 IPR036537 GO:0007166
Aev10g1821 670 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
Aev10g1821 670 MobiDBLite consensus disorder prediction 335 351 - -
Aev10g1821 670 SUPERFAMILY RING/U-box 249 334 - -
Aev10g1821 670 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Aev10g1821 670 MobiDBLite consensus disorder prediction 331 351 - -
Aev10g1821 670 SUPERFAMILY ARM repeat 356 639 IPR016024 -
Aev10g1821 670 Pfam U-box domain 258 328 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1821 Aev-Chr10 19986958 19990805 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1821 1 649 U-box Gene Family AT3G46510 70.923 0.0 942
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1821 - - pvu:PHAVU_011G064700g 1017.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1821 10 19986958 19990805 Aev10g1821 10 19986958 19990805 ECH