Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1808 ATGGCTATGGCCACTAGAGCTCTCTGCATTGTGTCCCTAATCTCATCAATGCTGATGGCTATTGAGGCTCGAATTCCAGGGGTTTACTCTGGGGGTGCTTGGCAGAGTGCTCATGCCACCTTCTATGGAGGTTCCGATGCTTCCGGCACCATGGGGGGAGCATGTGGGTATGGGAACCTGTACAGCCAAGGGTACGGAGTGAACACGGCGGCGCTGAGCACGGCGCTGTTCAACAGTGGGCTGAGCTGCGGCGCATGCTTTGAGATCAAGTGCGCCAACGACAGGCAGTGGTGCCACTCCGGCAGCCCCTCAATCTTCATCACGGCCACTAACTTCTGTCCGCCTAACTATGCTCTTCCCAACGACAACGGTGGGTGGTGCAACCCTCCAAGGCCGCACTTTGATCTTGCCATGCCCATGTTCCTCAAGATTGCTGAGTACCGTGCCGGAATCGTTCCTGTCGCCTATCGCCGGGTGGCATGCAGAAAGCACGGGGGGATAAGGTTCACAATCAACGGGTTCCGATACTTCAACCTGGTGCTGATTAGCAACGTGGCGGGCGCAGGGGATATCGTGCGCACCTACGTGAAGGGCACCAGAACAGGGTGGATGCCAATGAGCAGGAACTGGGGTCAGAACTGGCAGTCCAACGCCGTCTTGGTGGGCCAGGCCTTGTCCTTCAGGGTTACCGGCAGCGACCGTCGCACTTCTACCTCTTGGAACATTGCTCCTCCCAACTGGCAATTCGGTCAAACTTTCACCGGAAAGAATTTCCGTGTTTGA 783 0.5683 MAMATRALCIVSLISSMLMAIEARIPGVYSGGAWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNSGLSCGACFEIKCANDRQWCHSGSPSIFITATNFCPPNYALPNDNGGWCNPPRPHFDLAMPMFLKIAEYRAGIVPVAYRRVACRKHGGIRFTINGFRYFNLVLISNVAGAGDIVRTYVKGTRTGWMPMSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNIAPPNWQFGQTFTGKNFRV* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1808 260 Gene3D - 22 162 IPR036908 -
Aev10g1808 260 SMART dpbb_1 69 156 IPR007112 -
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 51 69 IPR007118 GO:0005576
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 241 255 IPR007118 GO:0005576
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 149 165 IPR007118 GO:0005576
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 73 91 IPR007118 GO:0005576
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 33 48 IPR007118 GO:0005576
Aev10g1808 260 PRINTS Expansin/Lol pI family signature 203 217 IPR007118 GO:0005576
Aev10g1808 260 SUPERFAMILY PHL pollen allergen 163 255 IPR036749 -
Aev10g1808 260 PANTHER EXPANSIN 6 259 - -
Aev10g1808 260 Pfam Lytic transglycolase 69 156 IPR009009 -
Aev10g1808 260 Pfam Expansin C-terminal domain 167 244 IPR007117 -
Aev10g1808 260 PANTHER EXPANSIN-A15 6 259 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 165 177 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 212 233 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 64 78 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 141 154 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 241 257 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 177 198 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 91 102 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 105 115 IPR002963 GO:0009664
Aev10g1808 260 PRINTS Expansin signature 124 141 IPR002963 GO:0009664
Aev10g1808 260 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 176 255 IPR007117 -
Aev10g1808 260 Gene3D - 166 258 IPR036749 -
Aev10g1808 260 SUPERFAMILY Barwin-like endoglucanases 33 184 IPR036908 -
Aev10g1808 260 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 52 166 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1808 Aev-Chr10 19915455 19917429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1808 8 260 Expansin Gene Family AT2G39700 83.794 1.14e-161 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1808 - - gmx:100809139 522.316
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1808 10 19915455 19917429 Aev10g1808 10 19915455 19917429 ECH
Aev10g1808 10 19915455 19917429 Aev07g2334 07 24106554 24109776 ECH
Aev10g1808 10 19915455 19917429 Aev04g3144 04 31030151 31033436 ECH
Aev06g2799 06 29545473 29550858 Aev10g1808 10 19915455 19917429 ECH
Aev02g1674 02 18434936 18437865 Aev10g1808 10 19915455 19917429 ECH
Aev10g1808 10 19915455 19917429 Aev04g3144 04 31030151 31033436 PCT