Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1793 ATGAGTTTCGTTTTCAGAGGTAGTAGGGGAGATCTTGAAAGCGGGTTTTCAGAATATGTTCCTGAAAGATCCTTAATGCGCGTTCATCCAGCTCGGCCAGTTAACAGCAATTCTCTGGCTTTTCTCACTACAGTTATTGTGCTATTCATGCTGTTAAACTCTCCTCAGATGACACATTATTTTATGATGTGGCTTGTGCTTGCGGTCTTTGCAATGGCTACAAGCCTGAGGATGTATGCTGCTTGTCAACATCTTCAAGCTCATGCCAGGGCTCACGCTGCAGCAGCCACAGGGTTGCTTGGTCATACTGAACTACGACTTCATGTGCCACCCTCCATAGCAATTGCAACTAGAGGACGATTGCAGGGACTTAGACTCCAGCTTGCACTTCTTGATCGTGATTTTGATGAGCTAGATTATGACACTTTGAGAGCTCTGGATTCTGATACTGCTTCTAGTACTACTTCAATGACTGAGGAAGAGATAAATGCCTTGCCCATCCACACATATAAAGTTGCTGTTCCAACAAAGGATATCTCAGCAGGGATGGGATCCTCTTCAGGTTCAGTTGAGAATAAACAAGACTCCGACGGAGCAGAGGGAAATCTCCGAGGTCCAGAAGATGAGCTGACATGCACCATATGCTTGGACCAAGTTAACAGAGGCGAGCTTGTACGTAGCCTGCCATGCTTGCATCAGTTTCATGCCAACTGCATTGATCCATGGCTCCGGCAGCAGGGAACATGTCCAGTGTGTAAATTCAAGATGGGGTCTGAATTTCAGGGTAACAGGGAGAGCGACTACTCTGATGGTTCAGATATTGTGTAG 828 0.4626 MSFVFRGSRGDLESGFSEYVPERSLMRVHPARPVNSNSLAFLTTVIVLFMLLNSPQMTHYFMMWLVLAVFAMATSLRMYAACQHLQAHARAHAAAATGLLGHTELRLHVPPSIAIATRGRLQGLRLQLALLDRDFDELDYDTLRALDSDTASSTTSMTEEEINALPIHTYKVAVPTKDISAGMGSSSGSVENKQDSDGAEGNLRGPEDELTCTICLDQVNRGELVRSLPCLHQFHANCIDPWLRQQGTCPVCKFKMGSEFQGNRESDYSDGSDIV* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1793 275 MobiDBLite consensus disorder prediction 181 196 - -
Aev10g1793 275 PANTHER TARGET OF ERK KINASE MPK-1 1 275 - -
Aev10g1793 275 Pfam Ring finger domain 211 253 IPR001841 -
Aev10g1793 275 PANTHER ZINC FINGER, C3HC4 TYPE (RING FINGER) PROTEIN 1 275 - -
Aev10g1793 275 ProSiteProfiles Zinc finger RING-type profile. 212 253 IPR001841 -
Aev10g1793 275 SUPERFAMILY RING/U-box 207 257 - -
Aev10g1793 275 MobiDBLite consensus disorder prediction 181 204 - -
Aev10g1793 275 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 198 269 IPR013083 -
Aev10g1793 275 SMART ring_2 212 252 IPR001841 -
Aev10g1793 275 CDD RING-H2_PA-TM-RING 211 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1793 Aev-Chr10 19841187 19843865 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1793 1 275 C3H Transcription Factor Family AT3G55530 70.397 2.90e-126 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1793 K16283 - gmx:100805406 398.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1793 10 19841187 19843865 Aev10g1793 10 19841187 19843865 ECH