Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1788 ATGGGAGAAGAGGTTAAGATCGCCGATTACCAAGGCGGCGGAGGTGGTGGTGGTGGTGGCGACGACGAGCGCGTCGCCGAGTGGGAGTTTGGTCTCCCCACCGCCGCTGACCTCCCGCCGCTCTCTCAGGCGCTGATCCCGCCGGAGCTCGCCTCCGCCTTCAGCATCTTGCCGGAGCCCTACCGGACGCTAATAGACGTCAATCGCGCCTCACACGACACAATCTCAGCCATCCGCGGCGGCGCCTCACAGGCCTTCTCCTCCAGTAACTTCCAAAACGACGACCGCGCCACCGTGCTGGAGCCAGACGCTGCCGCCGGCGACGCCGATGATGAGCCCGATCGAGACGGCTCTGGCTCAGATTCCAGGAAGCTCCGGAAGATCGACGGCGCCACCGAGGAGGCTGATTCGGCGGCTCCTCCGCTAGACGATCCATCCGCACGGTCTCTGAAGCGGCCGCGGCTCGTGTGGACGCCGCAGCTGCACAAGCGGTTCGTGGACGTGGTGGCGCACCTCGGAATCAAGAGCGCGGTGCCAAAGACAATTATGCAGTTGATGAACGTGGAGGGATTGACTCGGGAGAACGTCGCGAGCCACCTCCAGAAGTATCGACTGTACTTGAAGCGAATGCAAGGTTTATCCAACGAAGGTCCCTCTTCATCGGACCAGTTGTTCGCGTCCACGCCTGTGCCGCAGAGCTTGCACGAGTCCGGTGGTGCAGGTGGCGGAGGAGGAAGCGCGGGGCATTCACACGGGAACGGACATCTTTCGGTGCCGATTCCGATGCCATATCCGCCGCCGCCGGGGATGATGCCAATGCCGATGCTCGGGATGCCTCCAATGGGGATGGCCGTCGGGAACCATCACGGTTTCAACACGTTGCCGCCGCAGCAACGTGATTGGTCCGGTGCGAATAAGTACGGCTCGGTCGTTTCGTACCCTCACACTCAAACTCACAGCGTTACTCCTAGTGATAAGTGA 981 0.6208 MGEEVKIADYQGGGGGGGGGDDERVAEWEFGLPTAADLPPLSQALIPPELASAFSILPEPYRTLIDVNRASHDTISAIRGGASQAFSSSNFQNDDRATVLEPDAAAGDADDEPDRDGSGSDSRKLRKIDGATEEADSAAPPLDDPSARSLKRPRLVWTPQLHKRFVDVVAHLGIKSAVPKTIMQLMNVEGLTRENVASHLQKYRLYLKRMQGLSNEGPSSSDQLFASTPVPQSLHESGGAGGGGGSAGHSHGNGHLSVPIPMPYPPPPGMMPMPMLGMPPMGMAVGNHHGFNTLPPQQRDWSGANKYGSVVSYPHTQTHSVTPSDK* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1788 326 MobiDBLite consensus disorder prediction 1 24 - -
Aev10g1788 326 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 157 208 IPR017930 -
Aev10g1788 326 MobiDBLite consensus disorder prediction 213 261 - -
Aev10g1788 326 MobiDBLite consensus disorder prediction 213 234 - -
Aev10g1788 326 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 153 205 IPR006447 GO:0003677
Aev10g1788 326 MobiDBLite consensus disorder prediction 103 148 - -
Aev10g1788 326 SUPERFAMILY Homeodomain-like 150 209 IPR009057 -
Aev10g1788 326 Gene3D - 149 211 - -
Aev10g1788 326 MobiDBLite consensus disorder prediction 111 133 - -
Aev10g1788 326 Pfam Myb-like DNA-binding domain 156 204 IPR001005 -
Aev10g1788 326 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 319 - -
Aev10g1788 326 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 1 319 IPR044841 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1788 Aev-Chr10 19810280 19811260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1788 1 298 G2-like Transcription Factor Family AT3G46640 53.165 8.62e-85 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev10g1788 Myb_DNA-binding 2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1788 - - zju:107411020 372.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1788 10 19810280 19811260 Aev10g1788 10 19810280 19811260 ECH