Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1774 ATGAGCTACATGATGAACAATGGACAAGGTTGTTGGAGTGAAGTGGCAAGGAATGCAGGGCTGCAAAGGTGTGGCAAGAGTTGTCGGCTTCGGTGGATAAATTACTTGAGGCCTGATCTCAAAAGAGGCGCATTCTCCCCTCAGGAGGAACAACTCATCATTCACTTCCATTCCCTTCTTGGCAACAGATGGTCTCAAATAGCAGCACGTTTACCGGGACGAACAGATAACGAAGTAAAGAATTTTTGGAACTCAACGATGAAGAAAAGACTCAAGATCAACATTGTGTCTTCCACAAACACAAACTCATCAACTTCACCAAATGGAAGCTGCAGTGAGTACTCATCATCAGGGGAGTTTGTGACCATGTTAAATAATTCATGTCATCAACCATCACAATCATCATCAATGCAATTGCAAGCTAATAGTAATTCAGTTCTGAATACCATCAGGTCGAATATGTTGGAACAATTTGGACTAATAAACATGATGGTGCCAGCTACTAATAATGGTGTTGAGTTAGAAGAAAATAATGGGGTGTTTAGGGATATGTTTGTAATTCCACCTCTAGAGAGTGTTGGCAGTATCATCAGCAAGAGTAGTGATGATGAAGCAGCAGCTACTACTACTAACAATACTTGCTATTTTGATGACATAAACACTATCCTTAATAATAGTGACAGCAGATCTGAGAATAATAATAGGGTTGGGTTGGAGAATAATTCATTTCATGAGGACTTTGCCTTTTTGGGAGAGTGGAACTTGGAGGACTTGGTGAAAGATATTTCATCCTTTCCATTTCTTGATTTCTCATCAGTCTGA 822 0.4002 MSYMMNNGQGCWSEVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEQLIIHFHSLLGNRWSQIAARLPGRTDNEVKNFWNSTMKKRLKINIVSSTNTNSSTSPNGSCSEYSSSGEFVTMLNNSCHQPSQSSSMQLQANSNSVLNTIRSNMLEQFGLINMMVPATNNGVELEENNGVFRDMFVIPPLESVGSIISKSSDDEAAATTTNNTCYFDDINTILNNSDSRSENNNRVGLENNSFHEDFAFLGEWNLEDLVKDISSFPFLDFSSV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1774 273 CDD SANT 8 36 IPR001005 -
Aev10g1774 273 PANTHER TRANSCRIPTION FACTOR MYB46 1 271 - -
Aev10g1774 273 CDD SANT 44 84 IPR001005 -
Aev10g1774 273 ProSiteProfiles Myb-like domain profile. 1 36 IPR001005 -
Aev10g1774 273 SMART sant 2 38 IPR001005 -
Aev10g1774 273 SMART sant 41 89 IPR001005 -
Aev10g1774 273 Gene3D - 44 113 - -
Aev10g1774 273 SUPERFAMILY Homeodomain-like 22 94 IPR009057 -
Aev10g1774 273 Pfam Myb-like DNA-binding domain 42 85 IPR001005 -
Aev10g1774 273 Pfam Myb-like DNA-binding domain 7 36 IPR001005 -
Aev10g1774 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 36 IPR017930 -
Aev10g1774 273 ProSiteProfiles Myb-like domain profile. 37 87 IPR001005 -
Aev10g1774 273 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 37 91 IPR017930 -
Aev10g1774 273 Gene3D - 1 41 - -
Aev10g1774 273 PANTHER MYB DOMAIN PROTEIN 55 1 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1774 Aev-Chr10 19740522 19741473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1774 1 270 MYB Transcription Factor Family AT3G08500 42.193 2.49e-61 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev10g1774 Myb_DNA-binding 6.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1774 K09422 - gmx:100786151 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1774 10 19740522 19741473 Aev10g1774 10 19740522 19741473 ECH