Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1772 ATGGCTGCTGTAACTCCCTCAAAGCTCAATCTCCGATCCCAATCCAATCCCAAACCTTCTCCAGCTGTTACTCCTCACACCCCTCAATCCCTTCCACCTCCACGCAGATCCACGCGCCAACGGTCTCTCTCTTTCAAGCTCGTCGATGCCGAGAAGTCTCGTCAATCAATCGATATTGATGATTCCGCCGGAGACACGGTGATAATAAAACGTAGAATTGTAAATAGAGGAAATGCTTCTGCTGTTAAAGGTGGATCTGGAAAAAAAGGTGAATCAATGAAGCAGAAAAATGGGAAAAGTTCGGTTGAGGTTCCGTTTGCTCCACATTCCCCTGAGCCATCGGAATCGAAGAAGAGGAAGAGAGGAGATGGTGAGAGAAATGTTGTTACCAGAGCCATGTCCGCCAAGAAAGCGAAACCTGGGAGTTGTCGAAAGGGCAAGAGGTTGCCCGAGAGCCGAGTGTATTACAAGAAGGTGGTTTATGATGGTGGAGAGTTTGAAGTGGGTGATGATGTTTATGTGAAGAGGAGGGAAGATGCTAGCTCAGATGATGAAGAACCTGATACAGAGGAGTGTAGAGTGTGCTTTGATTCTGGGAGTGAGGTTATGATTGAGTGTGATGATTGTTTGGGAGGGTTTCATTTGAAATGCTTGAAGCCGCCATTGAAGGACGTTCCTGAAGGGGATTGGGTGTGTGTGTTCTGTGAGGCTCGGAAGATGGGTAGGAGTGTTAGCCTTCCAAAGCCACCGCAGGGTAAGAAACTCGCTAGGACACTGAGGCAGAAGCTTCTTTCAAGTGATTTGTGGGCTGCTCATATTGAAAGTATATGGAAGGAAGTGGATGGCAACTACTGGTGTCGGGTACGGTGGTATATAATCCCAGAAGAGACTTCTGTTGGGCGACAACCACACAACCTGAGCAGGGAGCTATATCGGACCAATGAGTTTGCAGATATTGAGATGGAATCTGTCATTAGACATTGCTTCATCATGACCCCCAAAGAGTATGCTAAGGCCAATGAGGGAGATGACATTTTCTTATGTGAATATGAATATGACATACATTGGCACAGTTTCAAACGCCTTGCTGATATTGACAATGAACAAGAGGATGGTGAAGAGAATGACAGTGATGAAGATTGGAACATTTCCAAGGAATCAGACTCTGATACAGATGGAGATGTTGAATATGAAGAGGAGGAGAACATAAAAAGTCCACAATCCCAGCCACCAACAAACCATCCGTTAGCTGCAAATCTGCACAAAGGAAAGTTTTTTGGACTTCAGAAGATAGGTACAAAAAGAATTCCAGAGCATGTAAGGTCTCACAAACAGACTGATCTTGAGAGAGCAAAGGCTACACTGTTGTTAGCATCATTGCCTAAATCTCTGCCTTGTAGAAATAAAGAAATGGATGAGATAACTACTTTCATTAAAGGTGCTATTTGTGATGATCAATGTCTGGGGCGTTGCCTCTACATCCATGGTGTTCCAGGAACTGGCAAGACAATGAGTGTACTATCAGTACTGAGAAGTTTGAAGTCAGAAGTTGATGCAGGAAACATCAAACCCTACTGTTTTGTGGAGATTAATGGCCTGAAATTGGCAACACCGGAGAATATTTATAGGGTTATATATGAGGCATTAAATGGACACAGGGTCAGCTGGAAAAAGGCTCTGCATTTGCTAAATGAGAGATTTGTAGAAGGCAAGAAAACTGGGGAAGAGGCTGACAGGCCATGTATTTTGCTTATTGATGAGCTTGATCTTCTTGTAACCAGAAACCAGTCGGTATTGTACAATATTCTTGACTGGCCTACGAGGGCACATTCCAAACTTATTGTGATAGGGATAGCAAATACGATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGAATACAAAGGCTTTGTTTTGGCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCAAGCCGCCTTAAAGGAATTGATGTATTTGAAAAGCAAGCCATAGAATTTGCTTCAAGAAAGGTCGCAGCAATCTCAGGAGATGCACGTCGTGCCTTGGAGATATGCAGACGTGCAGCTGAAATAACAGATTATCGTATAAAGAAGCTAGTTGCAAATCCTGATTCTCTTGCAACGGGAAAAGCACTTGTTGGTATGGCTGATGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTGATAAAAAGCTGTTCCAGATTTAGCAAAATCTTCCTGACAGCTATGGTGCACGAGCTTTATAAAACTGGAATGGGGGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCATGTCTCTGTACCAGTAATGGAGAAGTGTTTCCTGGATATGATACTCTTCTGCAAGTTGGTTGTAAGCTTGGCGAATGCAGAGTTATTTTATGCGAAGCAGGAGCCAAGCATAGGCTGCAGAAATTGCAGCTCAATTTCCCGAGCGATGATGTAGCCTTTGCGCTAAGGGACTGCAAAGATCTTCCTTGGCTGTCCAAGTACTTAACATAG 2538 0.4366 MAAVTPSKLNLRSQSNPKPSPAVTPHTPQSLPPPRRSTRQRSLSFKLVDAEKSRQSIDIDDSAGDTVIIKRRIVNRGNASAVKGGSGKKGESMKQKNGKSSVEVPFAPHSPEPSESKKRKRGDGERNVVTRAMSAKKAKPGSCRKGKRLPESRVYYKKVVYDGGEFEVGDDVYVKRREDASSDDEEPDTEECRVCFDSGSEVMIECDDCLGGFHLKCLKPPLKDVPEGDWVCVFCEARKMGRSVSLPKPPQGKKLARTLRQKLLSSDLWAAHIESIWKEVDGNYWCRVRWYIIPEETSVGRQPHNLSRELYRTNEFADIEMESVIRHCFIMTPKEYAKANEGDDIFLCEYEYDIHWHSFKRLADIDNEQEDGEENDSDEDWNISKESDSDTDGDVEYEEEENIKSPQSQPPTNHPLAANLHKGKFFGLQKIGTKRIPEHVRSHKQTDLERAKATLLLASLPKSLPCRNKEMDEITTFIKGAICDDQCLGRCLYIHGVPGTGKTMSVLSVLRSLKSEVDAGNIKPYCFVEINGLKLATPENIYRVIYEALNGHRVSWKKALHLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTRAHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFGPYNYQQLQEIISSRLKGIDVFEKQAIEFASRKVAAISGDARRALEICRRAAEITDYRIKKLVANPDSLATGKALVGMADVEAAIQEMFQAPHIQVIKSCSRFSKIFLTAMVHELYKTGMGETTFEKLAMTVSCLCTSNGEVFPGYDTLLQVGCKLGECRVILCEAGAKHRLQKLQLNFPSDDVAFALRDCKDLPWLSKYLT* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1772 845 Gene3D - 640 733 - -
Aev10g1772 845 SUPERFAMILY FYVE/PHD zinc finger 179 241 IPR011011 -
Aev10g1772 845 ProSiteProfiles Zinc finger PHD-type profile. 189 238 IPR019787 -
Aev10g1772 845 CDD AAA 469 645 - -
Aev10g1772 845 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 1 106 840 IPR020793 -
Aev10g1772 845 SMART AAA_5 488 642 IPR003593 -
Aev10g1772 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 458 701 IPR027417 -
Aev10g1772 845 ProSiteProfiles BAH domain profile. 236 363 IPR001025 GO:0003682
Aev10g1772 845 Pfam ATPase family associated with various cellular activities (AAA) 493 638 IPR003959 GO:0005524|GO:0016887
Aev10g1772 845 Pfam BAH domain 272 360 IPR001025 GO:0003682
Aev10g1772 845 MobiDBLite consensus disorder prediction 1 146 - -
Aev10g1772 845 MobiDBLite consensus disorder prediction 45 67 - -
Aev10g1772 845 Gene3D - 134 379 IPR043151 -
Aev10g1772 845 Pfam AAA lid domain 666 699 IPR041083 -
Aev10g1772 845 SMART PHD_3 191 236 IPR001965 -
Aev10g1772 845 MobiDBLite consensus disorder prediction 368 416 - -
Aev10g1772 845 SMART BAH_4 223 363 IPR001025 GO:0003682
Aev10g1772 845 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 179 252 IPR013083 -
Aev10g1772 845 MobiDBLite consensus disorder prediction 112 132 - -
Aev10g1772 845 Pfam PHD-finger 192 237 IPR019787 -
Aev10g1772 845 ProSitePatterns Zinc finger PHD-type signature. 192 235 IPR019786 -
Aev10g1772 845 Gene3D - 444 639 IPR027417 -
Aev10g1772 845 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 106 840 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1772 Aev-Chr10 19720256 19725575 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1772 5 844 Core DNA Replication Machinery Family AT4G14700 61.675 0.0 1023
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Aev10g1772 AAA 2e-19 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1772 K02603 - gmx:100798547 1357.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1772 10 19720256 19725575 Aev10g1772 10 19720256 19725575 ECH