Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev10g1765 ATGATGACGGATCCATATTGCTCCAAGGACGACTTGAATGGCAATTGGTTTGACCTCAATTCCCCAACCCTCCTTTTCTCTTCTTCTTCATCATCTTGCTCCAATAACCCACTACCACCATTCTATTTTCCTCCTCCTCCTCCTTCTTCTTCTTCTAGTTATCATCATCATCTTCATAGTTATTTCACAACAAGTGGTTGCAACAACAACAACAATAATCACAGTAACATCTCTTTCATCAATACTCACCATCAGCAGCAGAACAGATCCTACTCGCCTCCAAGACAAGGGCTACTCGCTCTCCTAAACCTAAGCCCTACAAGAAGGAATCGCGAGGAATCTTCCTTCGATGCCATGGAAGTTGACAAGGAGAAGAACAAGACCATCTCATCTAATAATAACAATAATAGTAGTATAATTGATGATGATGATGGTGTTACAGTGGCTTTGCACTTAGGGCTTCCAAGCAGCACTACAAGCACAAGTACAAAATCAAACATGTATTCATCAACATCGGAAAAAGAAGAAGAGGAAGAAGAAGAAGAAGAAAAAGGGATGAGTATTGTGGATGATGAGCAGGAGTACGAGTGGGCATCAAATAGGATCAAGAGAGGGCAGTATTGGATCCCTACCCCAACTCAGATTCTCATTGGTCCAACGCAATTCTCCTGCCCCCTTTGTTTCAAGACCTTCAATCGATACAACAACATGCAGATGCATATGTGGGGGCATGGATCTCAATACAGAAAGGGGCCAGAATCACTTCGGGGAAGCCAGCCAACAGCAATGCTAAGGCTGCCATGCTATTGCTGTGCACCCGGGTGCAAGAACAACATAGACCACCCAAGAGCCAAGCCGCTAAAGGACTTCAGAACCCTGCAAACGCATTACAAGAGGAAGCATGGGATAAAGCCGTTCATGTGCAGGAAGTGCTGCAAAGCATTTGCTGTGAGAGGCGATTGGAGGACTCATGAGAAGAACTGCGGCAAGCTATGGTACTGCTCTTGCGGCTCCGATTTCAAGCACAAGAGGTCTCTTAAGGATCACATCAAGGCCTTCGGCAACGGACACAAGCCTTATGGCCTTGACTCTGCTTCTCTTGATCAAGATGATGAACCTGCCTCTGAAATTGACCATGATAATTATCATCTTTCTACTACTCATGCCTGA 1170 0.4496 MMTDPYCSKDDLNGNWFDLNSPTLLFSSSSSSCSNNPLPPFYFPPPPPSSSSSYHHHLHSYFTTSGCNNNNNNHSNISFINTHHQQQNRSYSPPRQGLLALLNLSPTRRNREESSFDAMEVDKEKNKTISSNNNNNSSIIDDDDGVTVALHLGLPSSTTSTSTKSNMYSSTSEKEEEEEEEEEKGMSIVDDEQEYEWASNRIKRGQYWIPTPTQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGSQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKAFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGNGHKPYGLDSASLDQDDEPASEIDHDNYHLSTTHA* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev10g1765 389 MobiDBLite consensus disorder prediction 364 389 - -
Aev10g1765 389 MobiDBLite consensus disorder prediction 173 187 - -
Aev10g1765 389 MobiDBLite consensus disorder prediction 110 127 - -
Aev10g1765 389 ProSitePatterns Zinc finger C2H2 type domain signature. 224 244 IPR013087 -
Aev10g1765 389 PANTHER ZINC FINGER PROTEIN WIP2 50 381 IPR043584 GO:0003700|GO:0010468
Aev10g1765 389 SUPERFAMILY beta-beta-alpha zinc fingers 288 326 IPR036236 -
Aev10g1765 389 ProSiteProfiles Zinc finger C2H2 type domain profile. 326 359 IPR013087 -
Aev10g1765 389 MobiDBLite consensus disorder prediction 153 187 - -
Aev10g1765 389 PANTHER TESTA 1 PROTEIN, PUTATIVE-RELATED 50 381 - -
Aev10g1765 389 MobiDBLite consensus disorder prediction 110 140 - -
Aev10g1765 389 ProSiteProfiles Zinc finger C2H2 type domain profile. 222 249 IPR013087 -
Aev10g1765 389 Gene3D Classic Zinc Finger 303 378 - -
Aev10g1765 389 Gene3D Classic Zinc Finger 221 244 - -
Aev10g1765 389 MobiDBLite consensus disorder prediction 153 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev10g1765 Aev-Chr10 19679348 19681966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev10g1765 73 378 C2H2 Transcription Factor Family AT1G51220 60.194 6.06e-130 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev10g1765 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev10g1765 - - gmx:100789416 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g1765 10 19679348 19681966 Aev10g1765 10 19679348 19681966 ECH
Aev10g1765 10 19679348 19681966 Aev04g3202 04 31408931 31415455 ECH
Aev06g1283 06 8567394 8570519 Aev10g1765 10 19679348 19681966 ECH
Aev10g1765 10 19679348 19681966 Aev04g3202 04 31408931 31415455 PCT